RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 A0A1W2PRD5 423 aa15.73■□□□□ 0.11
ACTN4-208ENST00000497637 A0A1W2PRF3 423 aa15.73■□□□□ 0.11
ACTN4-208ENST00000497637 A0A1W2PRM7 423 aa15.73■□□□□ 0.11
ACTN4-208ENST00000497637 CGB1A6NKQ9 187 aa15.73■□□□□ 0.11
ACTN4-208ENST00000497637 KRBOX1C9JBD0 128 aa15.73■□□□□ 0.11
ACTN4-208ENST00000497637 TSPAN15O95858 294 aa15.73■□□□□ 0.11
ACTN4-208ENST00000497637 RNASE2P10153 161 aaKnown RBP15.73■□□□□ 0.11
ACTN4-208ENST00000497637 CNTFRP26992 372 aa15.73■□□□□ 0.11
ACTN4-208ENST00000497637 FHITP49789 147 aa15.73■□□□□ 0.11
ACTN4-208ENST00000497637 TPSG1Q9NRR2 321 aa15.73■□□□□ 0.11
ACTN4-208ENST00000497637 METTL1Q9UBP6 276 aaKnown RBP15.73■□□□□ 0.11
ACTN4-208ENST00000497637 TET2Q6N021 2002 aaPredicted RBP15.72■□□□□ 0.11
ACTN4-208ENST00000497637 MPDU1O75352 247 aa15.72■□□□□ 0.11
ACTN4-208ENST00000497637 MOSP00540 346 aa15.72■□□□□ 0.11
ACTN4-208ENST00000497637 ZP3P21754 424 aa15.72■□□□□ 0.11
ACTN4-208ENST00000497637 ZNF616Q08AN1 781 aa15.72■□□□□ 0.11
ACTN4-208ENST00000497637 MRPL41Q8IXM3 137 aaKnown RBP15.72■□□□□ 0.11
ACTN4-208ENST00000497637 NPBQ8NG41 125 aa15.72■□□□□ 0.11
ACTN4-208ENST00000497637 MALSU1Q96EH3 234 aa15.72■□□□□ 0.11
ACTN4-208ENST00000497637 E7EUB6 86 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 AVPP01185 164 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 SNCAP37840 140 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 TUSC1Q2TAM9 212 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 TMEM41BQ5BJD5 291 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 DYNAPQ8N1N2 210 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 ZNF709Q8N972 641 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 LFNGQ8NES3 379 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 BPIFCQ8NFQ6 507 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 OR10W1Q8NGF6 305 aa15.71■□□□□ 0.11
ACTN4-208ENST00000497637 CMYA5Q8N3K9 4069 aa15.71■□□□□ 0.1
ACTN4-208ENST00000497637 TRAV1-1A0A0B4J248 108 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 A0A1B0GW64 132 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 BTBD17A6NE02 478 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 C17orf112F2Z3M2 114 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 SOX15O60248 233 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 H2AFB1P0C5Y9 115 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 RPL27AP46776 148 aaKnown RBP15.7■□□□□ 0.1
ACTN4-208ENST00000497637 EBI3Q14213 229 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 SSX2Q16385 188 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 C10orf55Q5SWW7 151 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 SPSB3Q6PJ21 355 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 PPP1R27Q86WC6 154 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 OR2T10Q8NGZ9 312 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 AJUBAQ96IF1 538 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 EAF1Q96JC9 268 aaPredicted RBP15.7■□□□□ 0.1
ACTN4-208ENST00000497637 LINC00052Q96N35 136 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 NPCDR1Q9BY65 106 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 FBXL15Q9H469 300 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 RPRMQ9NS64 109 aa15.7■□□□□ 0.1
ACTN4-208ENST00000497637 ACTL6BO94805 426 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 NDUFA3O95167 84 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 IGKV1D-33P01593 117 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 IGKV1-33P01594 117 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 HBE1P02100 147 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 MBP02144 154 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 GATA3P23771 443 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 SUB1P53999 127 aaKnown RBP eCLIP15.69■□□□□ 0.13e-13■□□□□ 8.4
ACTN4-208ENST00000497637 MBD3L1Q8WWY6 194 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 NPVFQ9HCQ7 196 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 WNK2Q9Y3S1 2297 aa15.69■□□□□ 0.1
ACTN4-208ENST00000497637 NBR2O15453 112 aa15.68■□□□□ 0.1
ACTN4-208ENST00000497637 GPX4P36969 197 aaPredicted RBP15.68■□□□□ 0.1
ACTN4-208ENST00000497637 WT1-ASQ06250 92 aa15.68■□□□□ 0.1
ACTN4-208ENST00000497637 TNXAQ16473 311 aa15.68■□□□□ 0.1
ACTN4-208ENST00000497637 ARSJQ5FYB0 599 aaPredicted RBP15.68■□□□□ 0.1
ACTN4-208ENST00000497637 PVRIGQ6DKI7 326 aa15.68■□□□□ 0.1
ACTN4-208ENST00000497637 Q8N6K4 173 aa15.68■□□□□ 0.1
ACTN4-208ENST00000497637 SRSF8Q9BRL6 282 aaKnown RBP15.68■□□□□ 0.1
ACTN4-208ENST00000497637 LSM4Q9Y4Z0 139 aaKnown RBP15.68■□□□□ 0.1
ACTN4-208ENST00000497637 TMEM218A2RU14 115 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 SMCO3A2RU48 225 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 M0QZ24 198 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 NPFFO15130 113 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 CD5P06127 495 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 SNRNP70P08621 437 aaKnown RBP15.67■□□□□ 0.1
ACTN4-208ENST00000497637 OR13C7P0DN81 318 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 RAB2AP61019 212 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 ACSM6Q6P461 480 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 RNASEH2CQ8TDP1 164 aaKnown RBP15.67■□□□□ 0.1
ACTN4-208ENST00000497637 C17orf50Q8WW18 174 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 CACNG8Q8WXS5 425 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 SCRT1Q9BWW7 348 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 VSIRQ9H7M9 311 aa15.67■□□□□ 0.1
ACTN4-208ENST00000497637 TNCP24821 2201 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 CENPVL3A0A0U1RRI6 287 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 IGLC7A0M8Q6 106 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 AGPAT2O15120 278 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 RNASE1P07998 156 aaKnown RBP15.66■□□□□ 0.1
ACTN4-208ENST00000497637 OPRK1P41145 380 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 ELLP55199 621 aaPredicted RBP15.66■□□□□ 0.1
ACTN4-208ENST00000497637 SRSF3P84103 164 aaKnown RBP15.66■□□□□ 0.1
ACTN4-208ENST00000497637 CD69Q07108 199 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 HNF4GQ14541 408 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 MMDQ15546 238 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 FFAR4Q5NUL3 377 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 TMEM144Q7Z5S9 345 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 SIGLECL1Q8N7X8 197 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 ZNF114Q8NC26 417 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 P2RX4Q99571 388 aa15.66■□□□□ 0.1
ACTN4-208ENST00000497637 TREM1Q9NP99 234 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms