RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 BTBD17A6NE02 478 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 CRYGCP07315 174 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 AREGP15514 252 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 CTRB1P17538 263 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 CRIP2P52943 208 aaPredicted RBP11.19□□□□□ -0.62
VPS26A-209ENST00000497564 DLK1P80370 383 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 SCGB2A2Q13296 93 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 CLINT1Q14677 625 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 CTRB2Q6GPI1 263 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 LILRB2Q8N423 598 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 OR1P1Q8NH06 330 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 SGMS2Q8NHU3 365 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 RNASEH2CQ8TDP1 164 aaKnown RBP11.19□□□□□ -0.62
VPS26A-209ENST00000497564 PHYHIPLQ96FC7 376 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 P2RX4Q99571 388 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 HSPB9Q9BQS6 159 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 VPREB3Q9UKI3 123 aa11.19□□□□□ -0.62
VPS26A-209ENST00000497564 PAIP2BQ9ULR5 123 aaKnown RBP11.19□□□□□ -0.62
VPS26A-209ENST00000497564 NPIPB5A8MRT5 1133 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 TSPAN9O75954 239 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 IFNA4P05014 189 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 EGR2P11161 476 aaPredicted RBP11.18□□□□□ -0.62
VPS26A-209ENST00000497564 ASPHD1Q5U4P2 390 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 ZNF767PQ75MW2 155 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 BAP18Q8IXM2 172 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 OR1L6Q8NGR2 347 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 ABHD5Q8WTS1 349 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 TMEM68Q96MH6 324 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 GINS3Q9BRX5 216 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 TMEM147Q9BVK8 224 aa11.18□□□□□ -0.62
VPS26A-209ENST00000497564 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
VPS26A-209ENST00000497564 CORTO00230 105 aa11.17□□□□□ -0.62
VPS26A-209ENST00000497564 CFDP00746 253 aaPredicted RBP11.17□□□□□ -0.62
VPS26A-209ENST00000497564 IFNA7P01567 189 aa11.17□□□□□ -0.62
VPS26A-209ENST00000497564 IGHG2P01859 326 aa11.17□□□□□ -0.62
VPS26A-209ENST00000497564 GPX4P36969 197 aaPredicted RBP11.17□□□□□ -0.62
VPS26A-209ENST00000497564 KLK9Q2XQG4 91 aa11.17□□□□□ -0.62
VPS26A-209ENST00000497564 ZNF680Q8NEM1 530 aa11.17□□□□□ -0.62
VPS26A-209ENST00000497564 TAF15Q92804 592 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS26A-209ENST00000497564 UQCC1Q9NVA1 299 aa11.17□□□□□ -0.62
VPS26A-209ENST00000497564 ZNF580Q9UK33 172 aa11.17□□□□□ -0.62
VPS26A-209ENST00000497564 KLK9Q9UKQ9 250 aa11.17□□□□□ -0.62
VPS26A-209ENST00000497564 FBXO7Q9Y3I1 522 aa11.17□□□□□ -0.62
VPS26A-209ENST00000497564 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 DNAJC9-AS1A6NH13 148 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 ATP6V0E1O15342 81 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
VPS26A-209ENST00000497564 FBXO24O75426 580 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 IFNA5P01569 189 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 REG1AP05451 166 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
VPS26A-209ENST00000497564 MFAP2P55001 183 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 CD69Q07108 199 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 EXOSC2Q13868 293 aaKnown RBP11.16□□□□□ -0.62
VPS26A-209ENST00000497564 AKIRIN2Q53H80 203 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 CACNG8Q8WXS5 425 aa11.16□□□□□ -0.62
VPS26A-209ENST00000497564 FAM103A1Q9BTL3 118 aaKnown RBP11.16□□□□□ -0.62
VPS26A-209ENST00000497564 IGF1P05019 195 aa11.15□□□□□ -0.62
VPS26A-209ENST00000497564 APELAP0DMC3 54 aa11.15□□□□□ -0.62
VPS26A-209ENST00000497564 C19orf54Q5BKX5 351 aa11.15□□□□□ -0.62
VPS26A-209ENST00000497564 EIF5AL1Q6IS14 154 aaKnown RBP11.15□□□□□ -0.62
VPS26A-209ENST00000497564 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
VPS26A-209ENST00000497564 SCARB1Q8WTV0 552 aa11.15□□□□□ -0.62
VPS26A-209ENST00000497564 WDR61Q9GZS3 305 aaKnown RBP11.15□□□□□ -0.62
VPS26A-209ENST00000497564 WNT10AQ9GZT5 417 aa11.15□□□□□ -0.62
VPS26A-209ENST00000497564 PARP11Q9NR21 331 aa11.15□□□□□ -0.62
VPS26A-209ENST00000497564 DMRT1Q9Y5R6 373 aa11.15□□□□□ -0.62
VPS26A-209ENST00000497564 UBE2L5PA0A1B0GUS4 154 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 TRIM77I1YAP6 450 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 MPDU1O75352 247 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 SPP1P10451 314 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 ARSJQ5FYB0 599 aaPredicted RBP11.14□□□□□ -0.63
VPS26A-209ENST00000497564 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 LFNGQ8NES3 379 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 GNPNAT1Q96EK6 184 aaPredicted RBP11.14□□□□□ -0.63
VPS26A-209ENST00000497564 JMJD8Q96S16 334 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 NPVFQ9HCQ7 196 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 UBQLN2Q9UHD9 624 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 WDR83OSQ9Y284 106 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 TIMM9Q9Y5J7 89 aa11.14□□□□□ -0.63
VPS26A-209ENST00000497564 IGLV11-55A0A075B6I3 123 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 RPS10-NUDT3A0A1W2PQS6 291 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 SH2D7A6NKC9 451 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-209ENST00000497564 LINC01548A6NM66 108 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 CYB5BO43169 146 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 ATP6V0CP27449 155 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 BLCAPP62952 87 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 SLC25A24Q6NUK1 477 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 UNQ5815/PRO19632Q6UWF5 114 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 ALKAL2Q6UX46 152 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 TREML4Q6UXN2 200 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 RBMS3Q6XE24 437 aaKnown RBP11.13□□□□□ -0.63
VPS26A-209ENST00000497564 SLC16A13Q7RTY0 426 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 SLC35E3Q7Z769 313 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 CENPVQ7Z7K6 275 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-209ENST00000497564 SCGB1C1Q8TD33 95 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 PSMG3Q9BT73 122 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms