RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 LOXL1Q08397 574 aaPredicted RBP2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 KRTAP21-3Q3LHN1 58 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 ETDBQ3ZM63 59 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 LEG1Q6P5S2 330 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM150AQ86TG1 271 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 SFTPA2Q8IWL1 248 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 C11orf53Q8IXP5 236 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 PIANPQ8IYJ0 282 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC25A45Q8N413 288 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 OR10G8Q8NGN5 311 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 FGF14Q92915 247 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 RAB37Q96AX2 223 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 DNAJA3Q96EY1 480 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 ZC2HC1AQ96GY0 325 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 FMC1Q96HJ9 113 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 COMMD5Q9GZQ3 224 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 GLIPR2Q9H4G4 154 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 NAA60Q9H7X0 242 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 BCL2L10Q9HD36 194 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 NRN1Q9NPD7 142 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 LAMTOR3Q9UHA4 124 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 OARD1Q9Y530 152 aa2.49□□□□□ -2.01
SNRNP48-202ENST00000496946 PHRF1Q9P1Y6 1649 aaKnown RBP2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 TRBV6-7A0A0A0MS04 114 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 C3orf85A0A1B0GTC6 90 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 TEX50A0A1B0GTY4 177 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 OOSP1A8MZH6 123 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 SHISA9B4DS77 424 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 K7EMT4 169 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 M0R2P5 195 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 RRHO14718 337 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF737O75373 536 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 ARL6IP5O75915 188 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 ATP5G1P05496 136 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 VDAC1P21796 283 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 PSMB8P28062 276 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 FAUP35544 74 aaKnown RBP2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 FBXW4P57775 412 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 ARFRP1Q13795 201 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 WFDC2Q14508 124 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 OR7A5Q15622 319 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 IGFBP7Q16270 282 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 KLF17Q5JT82 389 aaPredicted RBP2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 PARM1Q6UWI2 310 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 LHFPL1Q86WI0 220 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 NR2C2APQ86WQ0 139 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 RPS19BP1Q86WX3 136 aaKnown RBP2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM256Q8N2U0 113 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF441Q8N8Z8 693 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 NUP35Q8NFH5 326 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 OR5H2Q8NGV7 314 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 FGFBP3Q8TAT2 258 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 ZPLD1Q8TCW7 415 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 SSC4DQ8WTU2 575 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 SMIM4Q8WVI0 70 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 AQP10Q96PS8 301 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 GNB1LQ9BYB4 327 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 PRSS22Q9GZN4 317 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 CST11Q9H112 138 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 PLEKHF2Q9H8W4 249 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 MANBALQ9NQG1 85 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 CACNG5Q9UF02 275 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 RPUSD1Q9UJJ7 312 aaKnown RBP2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 LSM2Q9Y333 95 aaKnown RBP2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 INSL5Q9Y5Q6 135 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 CLTCQ00610 1675 aaKnown RBP2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 TOPAZ1Q8N9V7 1692 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 TRAV27A0A087WT01 109 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 H3BMG7 143 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 SYS1-DBNDD2H3BUS1 97 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 GPR137BO60478 399 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 LYZL6O75951 148 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 CD3DP04234 171 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 HERV-K104P61576 105 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 TAF10Q12962 218 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 SPRNQ5BIV9 151 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 DENND4CQ5VZ89 1909 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 ACP7Q6ZNF0 438 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 PPDPFLQ8WWR9 84 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF501Q96CX3 271 aaPredicted RBP2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 BORCS8Q96FH0 119 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC25A44Q96H78 314 aaPredicted RBP2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 KXD1Q9BQD3 176 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 GABARAPL3Q9BY60 117 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 PDFQ9HBH1 243 aa2.48□□□□□ -2.01
SNRNP48-202ENST00000496946 CKAP5Q14008 2032 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 RGPD8O14715 1765 aaPredicted RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 RGPD5Q99666 1765 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 MYOM1P52179 1685 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 TRAV13-1A0A0B4J241 112 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 LYRM9A8MSI8 78 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 SMKR1H3BMG3 65 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 CCL21O00585 134 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 ANGPTL7O43827 346 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 SOD1P00441 154 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 TRACP01848 142 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 IGHG1P01857 330 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 APOC2P02655 101 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 SRP19P09132 144 aaKnown RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 P0DMU3 169 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms