RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 CBLN1P23435 193 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 FCGR2BP31994 310 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 BTCP35070 178 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 CCR6P51684 374 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 ERHP84090 104 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 DEFB114Q30KQ6 69 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 CD300EQ496F6 205 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 FAM106AQ4KMX7 169 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 TM4SF20Q53R12 229 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 ZNF57Q68EA5 555 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 C11orf87Q6NUJ2 197 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 LYZL2Q7Z4W2 148 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 TMED4Q7Z7H5 227 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 MISP3Q96FF7 219 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 SLC25A21Q9BQT8 299 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 SMAD5-AS1Q9Y6J3 95 aa12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 HUWE1Q7Z6Z7 4374 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-215ENST00000496570 A0A0B4J2A0 478 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 ZNF320A2RRD8 509 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 A6NHS1 94 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 ZNF785A8K8V0 405 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 IGHV3-48P01763 117 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 SPCS3P61009 180 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 CD69Q07108 199 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 ANKRD55Q3KP44 614 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 SPSB3Q6PJ21 355 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 OR2K2Q8NGT1 345 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 TMEM190Q8WZ59 177 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 MLXQ9UH92 298 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 SHPKQ9UHJ6 478 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 SELENOKQ9Y6D0 94 aa12.17□□□□□ -0.46
DNMT3A-215ENST00000496570 IL7P13232 177 aa12.16□□□□□ -0.46
DNMT3A-215ENST00000496570 HOXA1P49639 335 aaPredicted RBP12.16□□□□□ -0.46
DNMT3A-215ENST00000496570 PPP1R1AQ13522 171 aa12.16□□□□□ -0.46
DNMT3A-215ENST00000496570 LCN12Q6JVE5 192 aa12.16□□□□□ -0.46
DNMT3A-215ENST00000496570 TMEM170AQ8WVE7 144 aa12.16□□□□□ -0.46
DNMT3A-215ENST00000496570 PDCD10Q9BUL8 212 aa12.16□□□□□ -0.46
DNMT3A-215ENST00000496570 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
DNMT3A-215ENST00000496570 MRPL36Q9P0J6 103 aaKnown RBP12.16□□□□□ -0.46
DNMT3A-215ENST00000496570 NDUFB6O95139 128 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 SNCAP37840 140 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 RBMS2Q15434 407 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 Q56UQ5 140 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 TRIQKQ629K1 86 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 LGI3Q8N145 548 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 LRTM2Q8N967 370 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 UBAC2Q8NBM4 344 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 UXS1Q8NBZ7 420 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 TXN2Q99757 166 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 TECRQ9NZ01 308 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 FLVCR2Q9UPI3 526 aa12.15□□□□□ -0.46
DNMT3A-215ENST00000496570 NAP1L6A6NFF2 107 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 NDUFA4O00483 81 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 PLA2G10O15496 165 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 NXPH3O95157 252 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 SFT2D2O95562 160 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 FRMD6-AS1P0C7T7 363 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 SULT1A3P0DMM9 295 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 SULT1A4P0DMN0 295 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 MFAP4P55083 255 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 ELLP55199 621 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 SRPXP78539 464 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 MLANAQ16655 118 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 WDR89Q96FK6 387 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 ASCL2Q99929 193 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 C19orf73Q9NVV2 129 aa12.14□□□□□ -0.47
DNMT3A-215ENST00000496570 IGHV3OR16-8A0A075B7F1 116 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 LINC00854A0A1B0GVQ3 168 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 A8MZ25 164 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 PITX3O75364 302 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 IGHV4-30-4P0DP06 118 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 ANXA3P12429 323 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 TNFRSF9Q07011 255 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 SMCO1Q147U7 214 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 CNPY1Q3B7I2 92 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 SBSPONQ8IVN8 264 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 TMEM61Q8N0U2 210 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 CENPSQ8N2Z9 138 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 DYNLRB2Q8TF09 96 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 PALMDQ9NP74 551 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 ENY2Q9NPA8 101 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 HSPB7Q9UBY9 170 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 UFC1Q9Y3C8 167 aa12.13□□□□□ -0.47
DNMT3A-215ENST00000496570 DUXBA0A1W2PPF3 345 aa12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 VAMP1P23763 118 aa12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 BTNL8Q6UX41 500 aa12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 MARC2Q969Z3 335 aa12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 OR10C1Q96KK4 312 aa12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 GAR1Q9NY12 217 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 MRPL27Q9P0M9 148 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 TENM3Q9P273 2699 aa12.12□□□□□ -0.47
DNMT3A-215ENST00000496570 A0A1B0GU03 582 aa12.11□□□□□ -0.47
DNMT3A-215ENST00000496570 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms