RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 OR52E6Q96RD3 313 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 CDX2Q99626 313 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR8D2Q9GZM6 311 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 UQCC1Q9NVA1 299 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 DOK5Q9P104 306 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 COMMD3Q9UBI1 195 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 HES2Q9Y543 173 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 RBM7Q9Y580 266 aaKnown RBP3.1□□□□□ -1.91
SF3B1-212ENST00000496458 SCN1AP35498 2009 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 EP300Q09472 2414 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-212ENST00000496458 ANK1P16157 1881 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 KNL1Q8NG31 2342 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 SMIM26A0A096LP01 95 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 FAM159BA6NKW6 160 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 TRAPPC2LH3BP13 241 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 FAAHO00519 579 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 STK16O75716 305 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 YIF1AO95070 293 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 SIX6O95475 246 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 EPPINO95925 133 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 IL5P05113 134 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 IL3P08700 152 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 GZMBP10144 247 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 CD79AP11912 226 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 CXCL3P19876 107 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 GZMHP20718 246 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 PRSS3P35030 304 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 APLNRP35414 380 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 TGFBR1P36897 503 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 CTBP2P56545 445 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF345Q14585 488 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 C6orf99Q4VX62 202 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 KHDC3LQ587J8 217 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 SAMD13Q5VXD3 122 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 ARL9Q6T311 187 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 ZCCHC23Q6ZST2 131 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 GLT6D1Q7Z4J2 308 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 TMEM144Q7Z5S9 345 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 C1orf158Q8N1D5 194 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 LYPD1Q8N2G4 141 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 CYB561D1Q8N8Q1 229 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 SLC26A10Q8NG04 563 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 OR2Z1Q8NG97 314 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 OR4S1Q8NGB4 309 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 OR4K5Q8NGD3 323 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 OR1P1Q8NH06 330 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 OR10D3Q8NH80 312 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 GNPDA2Q8TDQ7 276 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 CCL17Q92583 94 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 SFRP2Q96HF1 295 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 FMC1Q96HJ9 113 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 BTF3L4Q96K17 158 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 SPACA5Q96QH8 159 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 TP53RKQ96S44 253 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 PBDC1Q9BVG4 233 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 SAMD10Q9BYL1 202 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 PARP12Q9H0J9 701 aaKnown RBP3.09□□□□□ -1.91
SF3B1-212ENST00000496458 LINC00597Q9H2U6 94 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 WFDC1Q9HC57 220 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 PSG8Q9UQ74 426 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 SPTBN4Q9H254 2564 aa3.09□□□□□ -1.91
SF3B1-212ENST00000496458 KIAA1671Q9BY89 1806 aa3.09□□□□□ -1.92
SF3B1-212ENST00000496458 PLXNA4Q9HCM2 1894 aa3.09□□□□□ -1.92
SF3B1-212ENST00000496458 MUC3AQ02505 3323 aa3.09□□□□□ -1.92
SF3B1-212ENST00000496458 ZFHX2Q9C0A1 2572 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-212ENST00000496458 RALGAPA2Q2PPJ7 1873 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 TEX50A0A1B0GTY4 177 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 PGPA6NDG6 321 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 ARL5CA6NH57 179 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 OR5H14A6NHG9 310 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 PPP5D1E7EU14 171 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 SS18L1O75177 396 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-212ENST00000496458 CA2P00918 260 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 BGLAPP02818 100 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 PIPP12273 146 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-212ENST00000496458 ZNF140P52738 457 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-212ENST00000496458 NDUFA6P56556 154 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 H2BFSP57053 126 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 HIST1H3AP68431 136 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 RHOGP84095 191 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 H3F3AP84243 136 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 FABP5Q01469 135 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 HTR4Q13639 388 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 PLPPR5Q32ZL2 321 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 Q499Y3 187 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 CLLU1OSQ5K130 101 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 TMEM215Q68D42 235 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 HEPN1Q6WQI6 88 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 OLIG3Q7RTU3 272 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 UBALD2Q8IYN6 164 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 SLC35G3Q8N808 338 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 OR13C4Q8NGS5 318 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 YPEL4Q96NS1 127 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 CCDC115Q96NT0 180 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 OR7D2Q96RA2 312 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 MGLLQ99685 303 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 MIEN1Q9BRT3 115 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 SLC25A2Q9BXI2 301 aa3.08□□□□□ -1.92
SF3B1-212ENST00000496458 OR2J1Q9GZK6 312 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms