RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 APOHP02749 345 aaPredicted RBP9.56□□□□□ -0.88
USF1-207ENST00000496363 NANOS2P60321 138 aaKnown RBP9.56□□□□□ -0.88
USF1-207ENST00000496363 TSPAN5P62079 268 aa9.56□□□□□ -0.88
USF1-207ENST00000496363 PRCDQ00LT1 54 aa9.56□□□□□ -0.88
USF1-207ENST00000496363 TCF24Q7RTU0 167 aa9.56□□□□□ -0.88
USF1-207ENST00000496363 H2BFWTQ7Z2G1 175 aa9.56□□□□□ -0.88
USF1-207ENST00000496363 SNX29P2Q8IUI4 249 aa9.56□□□□□ -0.88
USF1-207ENST00000496363 LILRB2Q8N423 598 aa9.56□□□□□ -0.88
USF1-207ENST00000496363 ZNF114Q8NC26 417 aa9.56□□□□□ -0.88
USF1-207ENST00000496363 ST8SIA2Q92186 375 aa9.56□□□□□ -0.88
USF1-207ENST00000496363 IGHV3-66A0A0C4DH42 116 aa9.55□□□□□ -0.88
USF1-207ENST00000496363 GNG7O60262 68 aa9.55□□□□□ -0.88
USF1-207ENST00000496363 HSPE1P61604 102 aaKnown RBP9.55□□□□□ -0.88
USF1-207ENST00000496363 TOMM20LQ6UXN7 152 aa9.55□□□□□ -0.88
USF1-207ENST00000496363 TXN2Q99757 166 aa9.55□□□□□ -0.88
USF1-207ENST00000496363 RARRES2Q99969 163 aa9.55□□□□□ -0.88
USF1-207ENST00000496363 FAM212BQ9NTI7 297 aaPredicted RBP9.55□□□□□ -0.88
USF1-207ENST00000496363 COMMD3Q9UBI1 195 aa9.55□□□□□ -0.88
USF1-207ENST00000496363 DNAH2Q9P225 4427 aa9.55□□□□□ -0.88
USF1-207ENST00000496363 DNAH17Q9UFH2 4485 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 M0QYG6 137 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 DEFB4AO15263 64 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 S100GP29377 79 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 RNASE12Q5GAN4 147 aaKnown RBP9.54□□□□□ -0.88
USF1-207ENST00000496363 LEMD1Q68G75 181 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 LPCAT3Q6P1A2 487 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 FAM24BQ8N5W8 94 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 OR11H2Q8NH07 326 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 GATAD1Q8WUU5 269 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 CMTM3Q96MX0 182 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 FBXL17Q9UF56 701 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
USF1-207ENST00000496363 ST8SIA3O43173 380 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 DFFBO76075 338 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
USF1-207ENST00000496363 IGKV1-5P01602 117 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 PI3P19957 117 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 RCVRNP35243 200 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 UCP3P55916 312 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 CMC4P56277 68 aaPredicted RBP9.53□□□□□ -0.88
USF1-207ENST00000496363 NCS1P62166 190 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 ERHP84090 104 aaKnown RBP9.53□□□□□ -0.88
USF1-207ENST00000496363 C11orf45Q8TAV5 145 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 GINS3Q9BRX5 216 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 MS4A6AQ9H2W1 248 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 VSIRQ9H7M9 311 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 SCPEP1Q9HB40 452 aa9.53□□□□□ -0.88
USF1-207ENST00000496363 A0A1B0GU03 582 aa9.52□□□□□ -0.89
USF1-207ENST00000496363 HPGDSO60760 199 aa9.52□□□□□ -0.89
USF1-207ENST00000496363 APOA1P02647 267 aa9.52□□□□□ -0.89
USF1-207ENST00000496363 ELK1P19419 428 aa9.52□□□□□ -0.89
USF1-207ENST00000496363 DEFB131AP59861 70 aa9.52□□□□□ -0.89
USF1-207ENST00000496363 LGALS9CQ6DKI2 356 aa9.52□□□□□ -0.89
USF1-207ENST00000496363 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.89
USF1-207ENST00000496363 C11orf68Q9H3H3 251 aaKnown RBP9.52□□□□□ -0.89
USF1-207ENST00000496363 MRPL36Q9P0J6 103 aaKnown RBP9.52□□□□□ -0.89
USF1-207ENST00000496363 PUS1Q9Y606 427 aaKnown RBP eCLIP9.52□□□□□ -0.89
USF1-207ENST00000496363 A0A0B4J293 547 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 SMIM31A0A1B0GVY4 71 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 DNASE2O00115 360 aaPredicted RBP9.51□□□□□ -0.89
USF1-207ENST00000496363 P0C879 139 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 PGAM2P15259 253 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 NPBWR1P48145 328 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 VBP1P61758 197 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 RPL11P62913 178 aaKnown RBP9.51□□□□□ -0.89
USF1-207ENST00000496363 PAFAH1B2P68402 229 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 RBMS2Q15434 407 aaKnown RBP9.51□□□□□ -0.89
USF1-207ENST00000496363 ZNF600Q6ZNG1 722 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 SLC35G3Q8N808 338 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 DUSP18Q8NEJ0 188 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 TP53RKQ96S44 253 aa9.51□□□□□ -0.89
USF1-207ENST00000496363 A0A087WXM4 84 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 TMEM50AO95807 157 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
USF1-207ENST00000496363 SNCAP37840 140 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 ETV6P41212 452 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 AKR1C2P52895 323 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 PIGPP57054 158 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 RND3P61587 244 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 PRR20EP86478 221 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 PRR20CP86479 221 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 PRR20DP86480 221 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 PRR20BP86481 221 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 PRR20AP86496 221 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 TMEM187Q14656 261 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 LHFPL1Q86WI0 220 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 FUNDC2Q9BWH2 189 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 MFFQ9GZY8 342 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 VCX3AQ9NNX9 186 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 RABAC1Q9UI14 185 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 PKHD1P08F94 4074 aa9.5□□□□□ -0.89
USF1-207ENST00000496363 A0A0G2JRQ6 117 aa9.49□□□□□ -0.89
USF1-207ENST00000496363 IFNA17P01571 189 aa9.49□□□□□ -0.89
USF1-207ENST00000496363 IFNA4P05014 189 aa9.49□□□□□ -0.89
USF1-207ENST00000496363 GIG44P09565 113 aaPredicted RBP9.49□□□□□ -0.89
USF1-207ENST00000496363 HOXA1P49639 335 aaPredicted RBP9.49□□□□□ -0.89
USF1-207ENST00000496363 PPP5CP53041 499 aa9.49□□□□□ -0.89
USF1-207ENST00000496363 MLANAQ16655 118 aa9.49□□□□□ -0.89
USF1-207ENST00000496363 SP6Q3SY56 376 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms