RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 IFNA21P01568 189 aa12.56□□□□□ -0.4
SF3A1-209ENST00000496189 TRBV12-3P01733 135 aa12.56□□□□□ -0.4
SF3A1-209ENST00000496189 SUB1P53999 127 aaKnown RBP eCLIP12.56□□□□□ -0.4
SF3A1-209ENST00000496189 IFITM3Q01628 133 aa12.56□□□□□ -0.4
SF3A1-209ENST00000496189 KLK9Q2XQG4 91 aa12.56□□□□□ -0.4
SF3A1-209ENST00000496189 AARDQ4LEZ3 155 aa12.56□□□□□ -0.4
SF3A1-209ENST00000496189 NMSQ5H8A3 153 aa12.56□□□□□ -0.4
SF3A1-209ENST00000496189 CLEC19AQ6UXS0 136 aa12.56□□□□□ -0.4
SF3A1-209ENST00000496189 KLK9Q9UKQ9 250 aa12.56□□□□□ -0.4
SF3A1-209ENST00000496189 INS-IGF2F8WCM5 200 aa12.55□□□□□ -0.4
SF3A1-209ENST00000496189 BMPR1BO00238 502 aa12.55□□□□□ -0.4
SF3A1-209ENST00000496189 IGHV3-23P01764 117 aa12.55□□□□□ -0.4
SF3A1-209ENST00000496189 SLC25A6P12236 298 aa12.55□□□□□ -0.4
SF3A1-209ENST00000496189 FAM106AQ4KMX7 169 aa12.55□□□□□ -0.4
SF3A1-209ENST00000496189 OR2C3Q8N628 320 aa12.55□□□□□ -0.4
SF3A1-209ENST00000496189 OR1P1Q8NH06 330 aa12.55□□□□□ -0.4
SF3A1-209ENST00000496189 OR1S1Q8NH92 325 aa12.55□□□□□ -0.4
SF3A1-209ENST00000496189 VN1R17PQ8TDU5 208 aa12.55□□□□□ -0.4
SF3A1-209ENST00000496189 WI2-2373I1.2A0A1W2PRP0 233 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 CEBPZOSA8MTT3 80 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 PPP5D1E7EU14 171 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 K7EIL1 84 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 HOXB5P09067 269 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 PLET1Q6UQ28 207 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 ZNF114Q8NC26 417 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 DUSP18Q8NEJ0 188 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 MITD1Q8WV92 249 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 HIPK2Q9H2X6 1198 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 HEYLQ9NQ87 328 aaPredicted RBP12.54□□□□□ -0.4
SF3A1-209ENST00000496189 GAR1Q9NY12 217 aaKnown RBP12.54□□□□□ -0.4
SF3A1-209ENST00000496189 S4R3C0 116 aa12.54□□□□□ -0.4
SF3A1-209ENST00000496189 CLEC3BP05452 202 aa12.53□□□□□ -0.4
SF3A1-209ENST00000496189 NRARPQ7Z6K4 114 aa12.53□□□□□ -0.4
SF3A1-209ENST00000496189 CCDC140Q96MF4 163 aa12.53□□□□□ -0.4
SF3A1-209ENST00000496189 PRR25Q96S07 402 aa12.53□□□□□ -0.4
SF3A1-209ENST00000496189 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
SF3A1-209ENST00000496189 MFSD2BA6NFX1 497 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 FAM90A26D6RGX4 464 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 OR2C1O95371 312 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 GPR183P32249 361 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 TNFRSF9Q07011 255 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 GGNBP1Q5YKI7 109 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 NOXA1Q86UR1 476 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 ZNF431Q8TF32 576 aaPredicted RBP12.52□□□□□ -0.41
SF3A1-209ENST00000496189 MISP3Q96FF7 219 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 ATP6V0BQ99437 205 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 PALMDQ9NP74 551 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 HSPB7Q9UBY9 170 aa12.52□□□□□ -0.41
SF3A1-209ENST00000496189 ZNF320A2RRD8 509 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 CORTO00230 105 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 PRAF2O60831 178 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 MED6O75586 246 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 IL5P05113 134 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 HTR2BP41595 481 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 Q56UQ5 140 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 SPSB3Q6PJ21 355 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 GPHB5Q86YW7 130 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 UBAC2Q8NBM4 344 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 OR52B4Q8NGK2 314 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 ZNF502Q8TBZ5 544 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 DYNLRB2Q8TF09 96 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
SF3A1-209ENST00000496189 C21orf62Q9NYP8 219 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 SIGLEC8Q9NYZ4 499 aa12.51□□□□□ -0.41
SF3A1-209ENST00000496189 INMT-MINDY4F8WBC2 141 aa12.5□□□□□ -0.41
SF3A1-209ENST00000496189 LGALS9O00182 355 aa12.5□□□□□ -0.41
SF3A1-209ENST00000496189 SCGB2A1O75556 95 aa12.5□□□□□ -0.41
SF3A1-209ENST00000496189 NXPH3O95157 252 aa12.5□□□□□ -0.41
SF3A1-209ENST00000496189 IGLV1-51P01701 117 aa12.5□□□□□ -0.41
SF3A1-209ENST00000496189 SPNP16150 400 aa12.5□□□□□ -0.41
SF3A1-209ENST00000496189 C12orf45Q8N5I9 185 aaPredicted RBP12.5□□□□□ -0.41
SF3A1-209ENST00000496189 UXS1Q8NBZ7 420 aa12.5□□□□□ -0.41
SF3A1-209ENST00000496189 SEC22CQ9BRL7 303 aa12.5□□□□□ -0.41
SF3A1-209ENST00000496189 DMRT1Q9Y5R6 373 aa12.5□□□□□ -0.41
SF3A1-209ENST00000496189 DNAH3Q8TD57 4116 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 IGHV3-21A0A0B4J1V1 117 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 OR2T8A6NH00 312 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 TGOLN2O43493 480 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 PITX3O75364 302 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 ADAP1O75689 374 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 GP9P14770 177 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 MFAP2P55001 183 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 MFAP4P55083 255 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 ATP5IP56385 69 aaPredicted RBP12.49□□□□□ -0.41
SF3A1-209ENST00000496189 CD69Q07108 199 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 OR2K2Q8NGT1 345 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 DTD1Q8TEA8 209 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 SCARB1Q8WTV0 552 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 PINX1Q96BK5 328 aaKnown RBP12.49□□□□□ -0.41
SF3A1-209ENST00000496189 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 RBKSQ9H477 322 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 ZC4H2Q9NQZ6 224 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 UFC1Q9Y3C8 167 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 U3KQ87 197 aa12.49□□□□□ -0.41
SF3A1-209ENST00000496189 NUPL2O15504 423 aaKnown RBP12.48□□□□□ -0.41
SF3A1-209ENST00000496189 PTTG1O95997 202 aa12.48□□□□□ -0.41
SF3A1-209ENST00000496189 CSN3P07498 182 aa12.48□□□□□ -0.41
SF3A1-209ENST00000496189 RNASE2P10153 161 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms