RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SSX9Q7RTT3 188 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 ZNF680Q8NEM1 530 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 PXT1Q8NFP0 134 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 OR2AK2Q8NG84 335 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 OR10AC1Q8NH08 325 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 APH1BQ8WW43 257 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 AP3S1Q92572 193 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 ZNF503Q96F45 646 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 CPNE2Q96FN4 548 aaPredicted RBP6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 ZNF479Q96JC4 524 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 SULT4A1Q9BR01 284 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 Q9N2K0 584 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 MED9Q9NWA0 146 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 PIPOXQ9P0Z9 390 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 JPT1Q9UK76 154 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 DIMT1Q9UNQ2 313 aaKnown RBP6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 PRELID3BQ9Y3B1 194 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 U3KQ87 197 aa6.95□□□□□ -1.3
SMARCAL1-213ENST00000496037 H0YJW9 148 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 MPPED1O15442 326 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 CA1P00915 261 aaPredicted RBP6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 OR9G9P0C7N8 305 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 PPP1CCP36873 323 aaKnown RBP6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 PJVKQ0ZLH3 352 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 SLC25A30Q5SVS4 291 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 TRIQKQ629K1 86 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 RNASEKQ6P5S7 137 aaKnown RBP6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 GPHB5Q86YW7 130 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 PRSS35Q8N3Z0 413 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 OR10G2Q8NGC3 310 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 OR10K1Q8NGX5 313 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 OR4K15Q8NH41 348 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 ZNF431Q8TF32 576 aaPredicted RBP6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 RBPMSQ93062 196 aaKnown RBP6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 MARC2Q969Z3 335 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 REEP1Q9H902 201 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 IFT46Q9NQC8 304 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 CLN6Q9NWW5 311 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 ZNF581Q9P0T4 197 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 RPH3ALQ9UNE2 315 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 ST3GAL6Q9Y274 331 aa6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 EXOSC1Q9Y3B2 195 aaKnown RBP6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 SAMHD1Q9Y3Z3 626 aaKnown RBP6.94□□□□□ -1.3
SMARCAL1-213ENST00000496037 RPS10-NUDT3A0A1W2PQS6 291 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 FABP12A6NFH5 140 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 OR4C46A6NHA9 309 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 KRBOX1C9JBD0 128 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 SCO1O75880 301 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 S1PR2O95136 353 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 CT45A6P0DMU7 189 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 CT45A5P0DMU8 189 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 CT45A7P0DMV0 189 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 SDC2P34741 201 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 PPP3R1P63098 170 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 ZNF585BQ52M93 769 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 DDI2Q5TDH0 399 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 LIPKQ5VXJ0 399 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 ZNF600Q6ZNG1 722 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 C6orf223Q8N319 242 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 Q8NAQ8 132 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 OR13C3Q8NGS6 347 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 TNFAIP8L1Q8WVP5 186 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 GPER1Q99527 375 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 MGLLQ99685 303 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 MARVELD1Q9BSK0 173 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 PRRG3Q9BZD7 231 aa6.93□□□□□ -1.3
SMARCAL1-213ENST00000496037 TRAV18A0A075B6X5 111 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 TRBV5-7A0A0A0MS05 114 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 IGHV4-28A0A0C4DH34 117 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 GAGE12BA1L429 117 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 SMCO3A2RU48 225 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 RNF222A6NCQ9 220 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 MARCH11A6NNE9 402 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 GEMIN2O14893 280 aaKnown RBP6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 RAB29O14966 203 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 PLA2G10O15496 165 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 YPEL1O60688 119 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 GPX5O75715 221 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 PRH1P02810 166 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 PSMA1P25786 263 aaKnown RBP6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 HOXA1P49639 335 aaPredicted RBP6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 RBM11P57052 281 aaKnown RBP6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 SSBP2P81877 361 aaPredicted RBP6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 GPR176Q14439 515 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 MPV17LQ2QL34 196 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 C15orf32Q32M92 178 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 PYDC2Q56P42 97 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 RPL39P5Q59GN2 51 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 MEDAGQ5VYS4 303 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 GLT8D1Q68CQ7 371 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 SSX6Q7RTT6 188 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 FAM220AQ7Z4H9 259 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 BCDIN3DQ7Z5W3 292 aaKnown RBP6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 APRG1Q8IVJ8 170 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 NECAP1Q8NC96 275 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 SGK494Q96LW2 274 aa6.92□□□□□ -1.3
SMARCAL1-213ENST00000496037 YPEL2Q96QA6 119 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms