RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 FAM106AQ4KMX7 169 aa9.43□□□□□ -0.9
MRPL55-233ENST00000495899 TMEM268Q5VZI3 342 aa9.43□□□□□ -0.9
MRPL55-233ENST00000495899 ZNF57Q68EA5 555 aaPredicted RBP9.43□□□□□ -0.9
MRPL55-233ENST00000495899 OR52E5Q8NH55 327 aa9.43□□□□□ -0.9
MRPL55-233ENST00000495899 RNASE11Q8TAA1 199 aaKnown RBP9.43□□□□□ -0.9
MRPL55-233ENST00000495899 LHFPL5Q8TAF8 219 aa9.43□□□□□ -0.9
MRPL55-233ENST00000495899 TMEM230Q96A57 120 aa9.43□□□□□ -0.9
MRPL55-233ENST00000495899 PDCD10Q9BUL8 212 aa9.43□□□□□ -0.9
MRPL55-233ENST00000495899 PLEKHA3Q9HB20 300 aa9.43□□□□□ -0.9
MRPL55-233ENST00000495899 ST8SIA3O43173 380 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 IFNA17P01571 189 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 IGHV3-23P01764 117 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 CSN3P07498 182 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 H2AFB1P0C5Y9 115 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 H2AFB2P0C5Z0 115 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 SNCAP37840 140 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 MFAP2P55001 183 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 SUPT4H1P63272 117 aaKnown RBP9.42□□□□□ -0.9
MRPL55-233ENST00000495899 TMEM187Q14656 261 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 BAK1Q16611 211 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 TMEM128Q5BJH2 165 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 TRIQKQ629K1 86 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 Q6ZRM9 215 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 SLC35G3Q8N808 338 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 SCARB1Q8WTV0 552 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 S100ZQ8WXG8 99 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 BSCL2Q96G97 398 aaPredicted RBP9.42□□□□□ -0.9
MRPL55-233ENST00000495899 PRR25Q96S07 402 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
MRPL55-233ENST00000495899 C21orf62Q9NYP8 219 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 LSM4Q9Y4Z0 139 aaKnown RBP9.42□□□□□ -0.9
MRPL55-233ENST00000495899 S4R3C0 116 aa9.42□□□□□ -0.9
MRPL55-233ENST00000495899 A0A0B4J2A0 478 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 A0A0G2JRQ6 117 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 K7EIM0 57 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 HLA-AP01891 365 aaKnown RBP9.41□□□□□ -0.9
MRPL55-233ENST00000495899 SPNP16150 400 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 SUB1P53999 127 aaKnown RBP eCLIP9.41□□□□□ -0.9
MRPL55-233ENST00000495899 SPCS3P61009 180 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 SPSB3Q6PJ21 355 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 PLET1Q6UQ28 207 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 LGI3Q8N145 548 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 OR2K2Q8NGT1 345 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 GPR146Q96CH1 333 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 TXN2Q99757 166 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 SHPKQ9UHJ6 478 aa9.41□□□□□ -0.9
MRPL55-233ENST00000495899 CENPXA8MT69 81 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 A8MWP6 167 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 I3L2K1 104 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 TGOLN2O43493 480 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 LY86O95711 162 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 GP9P14770 177 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.9
MRPL55-233ENST00000495899 GPR183P32249 361 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 RBMS2Q15434 407 aaKnown RBP9.4□□□□□ -0.9
MRPL55-233ENST00000495899 ANKRD39Q53RE8 183 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 PVRIGQ6DKI7 326 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 TMED4Q7Z7H5 227 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 SDHCQ99643 169 aaPredicted RBP9.4□□□□□ -0.9
MRPL55-233ENST00000495899 C7orf50Q9BRJ6 194 aaKnown RBP9.4□□□□□ -0.9
MRPL55-233ENST00000495899 ENY2Q9NPA8 101 aa9.4□□□□□ -0.9
MRPL55-233ENST00000495899 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 DUXBA0A1W2PPF3 345 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 ZNF320A2RRD8 509 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 C2orf70A6NJV1 201 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 CORTO00230 105 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 SULT1A3P0DMM9 295 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 SULT1A4P0DMN0 295 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 FOLR2P14207 255 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 ELLP55199 621 aaPredicted RBP9.39□□□□□ -0.91
MRPL55-233ENST00000495899 UBE2MP61081 183 aaKnown RBP9.39□□□□□ -0.91
MRPL55-233ENST00000495899 ZNF846Q147U1 533 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 NMSQ5H8A3 153 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 LCN12Q6JVE5 192 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 CENPSQ8N2Z9 138 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 LRTM2Q8N967 370 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 MISP3Q96FF7 219 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 B9D2Q9BPU9 175 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 ZNF436Q9C0F3 470 aaPredicted RBP9.39□□□□□ -0.91
MRPL55-233ENST00000495899 WDR12Q9GZL7 423 aaKnown RBP9.39□□□□□ -0.91
MRPL55-233ENST00000495899 PALMDQ9NP74 551 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 TECRQ9NZ01 308 aaKnown RBP9.39□□□□□ -0.91
MRPL55-233ENST00000495899 CACNG5Q9UF02 275 aa9.39□□□□□ -0.91
MRPL55-233ENST00000495899 PRKDCP78527 4128 aaKnown RBP9.38□□□□□ -0.91
MRPL55-233ENST00000495899 OR2T8A6NH00 312 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 NDUFB6O95139 128 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 CTSGP08311 255 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 IL7P13232 177 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 CBLN1P23435 193 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 HOXA1P49639 335 aaPredicted RBP9.38□□□□□ -0.91
MRPL55-233ENST00000495899 CCR6P51684 374 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 MFAP4P55083 255 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 BSXQ3C1V8 233 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 Q56UQ5 140 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 SPINK9Q5DT21 86 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 ADAMTSL5Q6ZMM2 481 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 LYZL2Q7Z4W2 148 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 MARC2Q969Z3 335 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 UFC1Q9Y3C8 167 aa9.38□□□□□ -0.91
MRPL55-233ENST00000495899 SMAD5-AS1Q9Y6J3 95 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms