RNA–Protein interactions for RNA: ENST00000495636.1

SLC6A1-205, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 1,088 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-205ENST00000495636 IGHV3-49A0A0A0MS15 119 aa11.82□□□□□ -0.52
SLC6A1-205ENST00000495636 TRAV14DV4A0A0A6YYC5 116 aa11.82□□□□□ -0.52
SLC6A1-205ENST00000495636 RND3P61587 244 aa11.82□□□□□ -0.52
SLC6A1-205ENST00000495636 FAM90A2PQ658T7 463 aa11.82□□□□□ -0.52
SLC6A1-205ENST00000495636 FUNDC2Q9BWH2 189 aa11.82□□□□□ -0.52
SLC6A1-205ENST00000495636 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 HPGDSO60760 199 aa11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 IGHV3-48P01763 117 aa11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 CD5P06127 495 aa11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 ELK1P19419 428 aa11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 NPBWR1P48145 328 aa11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 TFPI2P48307 235 aa11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 VBP1P61758 197 aa11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 ZNF486Q96H40 463 aaPredicted RBP11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 CSTL1Q9H114 145 aa11.81□□□□□ -0.52
SLC6A1-205ENST00000495636 MPTX1A8MV57 137 aa11.8□□□□□ -0.52
SLC6A1-205ENST00000495636 INS-IGF2F8WCM5 200 aa11.8□□□□□ -0.52
SLC6A1-205ENST00000495636 M0QYG6 137 aa11.8□□□□□ -0.52
SLC6A1-205ENST00000495636 PGAM2P15259 253 aa11.8□□□□□ -0.52
SLC6A1-205ENST00000495636 PAFAH1B2P68402 229 aa11.8□□□□□ -0.52
SLC6A1-205ENST00000495636 ZNF124Q15973 351 aa11.8□□□□□ -0.52
SLC6A1-205ENST00000495636 RNASE10Q5GAN6 216 aaKnown RBP11.8□□□□□ -0.52
SLC6A1-205ENST00000495636 DUSP18Q8NEJ0 188 aa11.8□□□□□ -0.52
SLC6A1-205ENST00000495636 GATAD1Q8WUU5 269 aa11.8□□□□□ -0.52
SLC6A1-205ENST00000495636 IGHV3OR16-13A0A075B7E8 117 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 IGHV3-74A0A0B4J1X5 117 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 ATG12O94817 140 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 SNCAP37840 140 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 RORCP51449 518 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 AKR1C2P52895 323 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 PIGPP57054 158 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 IZUMO4Q1ZYL8 232 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 SPINK9Q5DT21 86 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 ZNF600Q6ZNG1 722 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 TCF24Q7RTU0 167 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 LHFPL1Q86WI0 220 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 GBGT1Q8N5D6 347 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 ARRDC1Q8N5I2 433 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 SLC35G3Q8N808 338 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 VSIRQ9H7M9 311 aa11.79□□□□□ -0.52
SLC6A1-205ENST00000495636 FAM25AB3EWG3 89 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 FAM25CB3EWG5 89 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 FAM25GB3EWG6 89 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 CORTO00230 105 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 ST8SIA3O43173 380 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 IGKV1-5P01602 117 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 P0C879 139 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 TBPP20226 339 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 MZT2AQ6P582 158 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 PHLDA1Q8WV24 401 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 ST8SIA2Q92186 375 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 AP3S1Q92572 193 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 TP53RKQ96S44 253 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 RARRES2Q99969 163 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 PDCD10Q9BUL8 212 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 KLK11Q9UBX7 282 aa11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 PUS1Q9Y606 427 aaKnown RBP eCLIP11.78□□□□□ -0.52
SLC6A1-205ENST00000495636 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.53
SLC6A1-205ENST00000495636 DFFBO76075 338 aa11.77□□□□□ -0.53
SLC6A1-205ENST00000495636 IFNA17P01571 189 aa11.77□□□□□ -0.53
SLC6A1-205ENST00000495636 PI3P19957 117 aa11.77□□□□□ -0.53
SLC6A1-205ENST00000495636 SUB1P53999 127 aaKnown RBP eCLIP11.77□□□□□ -0.53
SLC6A1-205ENST00000495636 RNASE12Q5GAN4 147 aaKnown RBP11.77□□□□□ -0.53
SLC6A1-205ENST00000495636 PVRIGQ6DKI7 326 aa11.77□□□□□ -0.53
SLC6A1-205ENST00000495636 TMEM231Q9H6L2 316 aa11.77□□□□□ -0.53
SLC6A1-205ENST00000495636 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
SLC6A1-205ENST00000495636 A0A0B4J293 547 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 DNASE2O00115 360 aaPredicted RBP11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 TMEM50AO95807 157 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 CD3DP04234 171 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 TRIM16LQ309B1 348 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 CCDC71LQ8N9Z2 235 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 OR52I2Q8NH67 350 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 MS4A6AQ9H2W1 248 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 C11orf68Q9H3H3 251 aaKnown RBP11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 COPZ2Q9P299 210 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 MTFP1Q9UDX5 166 aa11.76□□□□□ -0.53
SLC6A1-205ENST00000495636 CA1P00915 261 aaPredicted RBP11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 APOHP02749 345 aaPredicted RBP11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 RNASE2P10153 161 aaKnown RBP11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 HOXA1P49639 335 aaPredicted RBP11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 PPP5CP53041 499 aa11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 LILRB2Q8N423 598 aa11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 OR11H2Q8NH07 326 aa11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 ZFAND1Q8TCF1 268 aa11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 MFFQ9GZY8 342 aa11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 ENY2Q9NPA8 101 aa11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 EXTL2Q9UBQ6 330 aa11.75□□□□□ -0.53
SLC6A1-205ENST00000495636 IGHV3-66A0A0C4DH42 116 aa11.74□□□□□ -0.53
SLC6A1-205ENST00000495636 A0A1B0GU03 582 aa11.74□□□□□ -0.53
SLC6A1-205ENST00000495636 A0A1W2PS18 150 aa11.74□□□□□ -0.53
SLC6A1-205ENST00000495636 CLN5O75503 358 aa11.74□□□□□ -0.53
SLC6A1-205ENST00000495636 SCGB2A1O75556 95 aa11.74□□□□□ -0.53
SLC6A1-205ENST00000495636 B3GALNT1O75752 331 aa11.74□□□□□ -0.53
SLC6A1-205ENST00000495636 GABARAPO95166 117 aa11.74□□□□□ -0.53
SLC6A1-205ENST00000495636 UCP1P25874 307 aa11.74□□□□□ -0.53
SLC6A1-205ENST00000495636 OPRK1P41145 380 aa11.74□□□□□ -0.53
SLC6A1-205ENST00000495636 ETV6P41212 452 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms