RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 C15orf61A6NNL5 157 aa15.02■□□□□ -0
TSPAN4-212ENST00000494815 H0YJW9 148 aa15.02■□□□□ -0
TSPAN4-212ENST00000494815 DLEU1O43261 78 aa15.02■□□□□ -0
TSPAN4-212ENST00000494815 PRB1P04280 392 aa15.02■□□□□ -0
TSPAN4-212ENST00000494815 IGKV1-16P04430 117 aa15.02■□□□□ -0
TSPAN4-212ENST00000494815 SRP14P37108 136 aaKnown RBP15.02■□□□□ -0
TSPAN4-212ENST00000494815 OR2T10Q8NGZ9 312 aa15.02■□□□□ -0
TSPAN4-212ENST00000494815 OR4F5Q8NH21 305 aa15.02■□□□□ -0
TSPAN4-212ENST00000494815 OR4F4Q96R69 305 aa15.02■□□□□ -0
TSPAN4-212ENST00000494815 SSBP3Q9BWW4 388 aaPredicted RBP15.02■□□□□ -0
TSPAN4-212ENST00000494815 SPTAN1Q13813 2472 aaKnown RBP15.02■□□□□ -0
TSPAN4-212ENST00000494815 DCHS2Q6V1P9 2916 aa15.02■□□□□ -0
TSPAN4-212ENST00000494815 IGHV2-26A0A0B4J1V2 119 aa15.02□□□□□ -0.01
TSPAN4-212ENST00000494815 PRRX1P54821 245 aa15.02□□□□□ -0.01
TSPAN4-212ENST00000494815 HNF4GQ14541 408 aa15.02□□□□□ -0.01
TSPAN4-212ENST00000494815 ZNF843Q8N446 348 aa15.02□□□□□ -0.01
TSPAN4-212ENST00000494815 NABP2Q9BQ15 211 aa15.02□□□□□ -0.01
TSPAN4-212ENST00000494815 FUT9Q9Y231 359 aa15.02□□□□□ -0.01
TSPAN4-212ENST00000494815 FOXA2Q9Y261 457 aaPredicted RBP15.02□□□□□ -0.01
TSPAN4-212ENST00000494815 C22orf46C9J442 243 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 OVOL3O00110 214 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 HMGB3O15347 200 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 VENTXO95231 258 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 IGLV1-47P01700 117 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 IL6RP08887 468 aaPredicted RBP15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 ATP6V1FQ16864 119 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 TMEM37Q8WXS4 190 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 CLEC7AQ9BXN2 247 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 TMEM14BQ9NUH8 114 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 TRAV3A0A0B4J244 114 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 SOX15O60248 233 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 NDUFS7O75251 213 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 LINC00614P0C842 121 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 GAGE1Q13065 139 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 TMEM177Q53S58 311 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 PDPNQ86YL7 162 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 OR10G9Q8NGN4 311 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 OR10G7Q8NGN6 311 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 TMEM208Q9BTX3 173 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 TMEM147Q9BVK8 224 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 SNHG12Q9BXW3 62 aa15.01□□□□□ -0.01
TSPAN4-212ENST00000494815 EPG5Q9HCE0 2579 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 NPSP0C0P6 89 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 CLEC12BQ2HXU8 276 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 HLA-DRB5Q30154 266 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 GATAD1Q8WUU5 269 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 BET1LQ9NYM9 111 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 PRNDQ9UKY0 176 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 USP9XQ93008 2570 aaPredicted RBP15□□□□□ -0.01
TSPAN4-212ENST00000494815 REG1BP48304 166 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 IQCJQ1A5X6 159 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 SAPCD1Q5SSQ6 148 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 KCNIP4Q6PIL6 250 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 TCF19Q9Y242 345 aa15□□□□□ -0.01
TSPAN4-212ENST00000494815 FLNCQ14315 2725 aa14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 MYO18BQ8IUG5 2567 aa14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 LOC105371242A0A075B767 164 aa14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 MC5RP33032 325 aa14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 HSPE1P61604 102 aaKnown RBP14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 SPINK9Q5DT21 86 aa14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 OR4C13Q8NGP0 309 aa14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 FLYWCH2Q96CP2 140 aaKnown RBP14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 ONECUT1Q9UBC0 465 aa14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 WASHC3Q9Y3C0 194 aa14.99□□□□□ -0.01
TSPAN4-212ENST00000494815 ZNF462Q96JM2 2506 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 SRRM4A7MD48 611 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 PMS2P5A8MQ11 134 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 M0R1W7 72 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 VDAC2P45880 294 aaPredicted RBP14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 LCN2P80188 198 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 DIAPH2-AS1Q14236 149 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 FFAR4Q5NUL3 377 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 MRPL41Q8IXM3 137 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 OR10P1Q8NGE3 313 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 IGFBPL1Q8WX77 278 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 HARBI1Q96MB7 349 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 ZNF257Q9Y2Q1 563 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 UPK2O00526 184 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 CNN1P51911 297 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 GBGT1Q8N5D6 347 aa14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 AMMECR1Q9Y4X0 333 aaPredicted RBP14.98□□□□□ -0.01
TSPAN4-212ENST00000494815 PAGE4O60829 102 aa14.97□□□□□ -0.01
TSPAN4-212ENST00000494815 SAA1P0DJI8 122 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-212ENST00000494815 HEYLQ9NQ87 328 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-212ENST00000494815 FKBP11Q9NYL4 201 aa14.97□□□□□ -0.01
TSPAN4-212ENST00000494815 COL12A1Q99715 3063 aa14.97□□□□□ -0.01
TSPAN4-212ENST00000494815 C15orf62A8K5M9 175 aa14.97□□□□□ -0.01
TSPAN4-212ENST00000494815 BUB1B-PAK6H3BSN5 160 aa14.97□□□□□ -0.01
TSPAN4-212ENST00000494815 Q8N7P7 452 aa14.97□□□□□ -0.01
TSPAN4-212ENST00000494815 VSTM2AQ8TAG5 236 aa14.96□□□□□ -0.01
TSPAN4-212ENST00000494815 NPCDR1Q9BY65 106 aa14.96□□□□□ -0.01
TSPAN4-212ENST00000494815 OR51B2Q9Y5P1 312 aa14.96□□□□□ -0.01
TSPAN4-212ENST00000494815 CD99P14209 185 aa14.95□□□□□ -0.02
TSPAN4-212ENST00000494815 PRSS8Q16651 343 aa14.95□□□□□ -0.02
TSPAN4-212ENST00000494815 C1orf122Q6ZSJ8 110 aa14.95□□□□□ -0.02
TSPAN4-212ENST00000494815 OR4P4Q8NGL7 312 aa14.95□□□□□ -0.02
TSPAN4-212ENST00000494815 OR4A5Q8NH83 315 aa14.95□□□□□ -0.02
TSPAN4-212ENST00000494815 BTF3L4Q96K17 158 aa14.95□□□□□ -0.02
TSPAN4-212ENST00000494815 C11orf94C9JXX5 98 aa14.95□□□□□ -0.02
TSPAN4-212ENST00000494815 COX7A1P24310 79 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms