RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MFAP4P55083 255 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 TAS2R46P59540 309 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 LSM3P62310 102 aaKnown RBP9.27□□□□□ -0.93
SKA1-205ENST00000494518 IZUMO4Q1ZYL8 232 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 LEMD1Q68G75 181 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 TCF24Q7RTU0 167 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 OR1P1Q8NH06 330 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 ST8SIA2Q92186 375 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 Q9H521 79 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 TRAV14DV4A0A0A6YYC5 116 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 CA1P00915 261 aaPredicted RBP9.26□□□□□ -0.93
SKA1-205ENST00000494518 IGKV1-39P01597 117 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 IGKV1D-39P04432 117 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 RBMS2Q15434 407 aaKnown RBP9.26□□□□□ -0.93
SKA1-205ENST00000494518 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 TBC1D26Q86UD7 250 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 LILRB2Q8N423 598 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 OR6F1Q8NGZ6 308 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 OR4A16Q8NH70 328 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 C11orf45Q8TAV5 145 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 MRGPRFQ96AM1 343 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 OR10C1Q96KK4 312 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 CMTM3Q96MX0 182 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 ATP6V0BQ99437 205 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 YTHDF1Q9BYJ9 559 aaKnown RBP9.26□□□□□ -0.93
SKA1-205ENST00000494518 NXF2Q9GZY0 626 aaKnown RBP9.26□□□□□ -0.93
SKA1-205ENST00000494518 FKBP11Q9NYL4 201 aa9.26□□□□□ -0.93
SKA1-205ENST00000494518 KIAA1109Q2LD37 5005 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 ST8SIA3O43173 380 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 GNG7O60262 68 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 EIF4EP06730 217 aaKnown RBP9.25□□□□□ -0.93
SKA1-205ENST00000494518 NAT1P18440 290 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 PRSS3P35030 304 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 RPS19P39019 145 aaKnown RBP9.25□□□□□ -0.93
SKA1-205ENST00000494518 DEFB131AP59861 70 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 TSPAN5P62079 268 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 RPL11P62913 178 aaKnown RBP9.25□□□□□ -0.93
SKA1-205ENST00000494518 FAM90A2PQ658T7 463 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 TOMM20LQ6UXN7 152 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 H2BFWTQ7Z2G1 175 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 LYSMD2Q8IV50 215 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 FAM24BQ8N5W8 94 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 GATAD1Q8WUU5 269 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 SEC22AQ96IW7 307 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 TSC22D3Q99576 134 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 DNAH2Q9P225 4427 aa9.25□□□□□ -0.93
SKA1-205ENST00000494518 DNASE2O00115 360 aaPredicted RBP9.24□□□□□ -0.93
SKA1-205ENST00000494518 DFFBO76075 338 aa9.24□□□□□ -0.93
SKA1-205ENST00000494518 IFNA4P05014 189 aa9.24□□□□□ -0.93
SKA1-205ENST00000494518 PRCDQ00LT1 54 aa9.24□□□□□ -0.93
SKA1-205ENST00000494518 RNASE12Q5GAN4 147 aaKnown RBP9.24□□□□□ -0.93
SKA1-205ENST00000494518 SNX29P2Q8IUI4 249 aa9.24□□□□□ -0.93
SKA1-205ENST00000494518 MS4A6AQ9H2W1 248 aa9.24□□□□□ -0.93
SKA1-205ENST00000494518 C11orf68Q9H3H3 251 aaKnown RBP9.24□□□□□ -0.93
SKA1-205ENST00000494518 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
SKA1-205ENST00000494518 DNAH17Q9UFH2 4485 aa9.24□□□□□ -0.93
SKA1-205ENST00000494518 S100GP29377 79 aa9.23□□□□□ -0.93
SKA1-205ENST00000494518 CMC4P56277 68 aaPredicted RBP9.23□□□□□ -0.93
SKA1-205ENST00000494518 PAFAH1B2P68402 229 aa9.23□□□□□ -0.93
SKA1-205ENST00000494518 TMEM187Q14656 261 aa9.23□□□□□ -0.93
SKA1-205ENST00000494518 CADM3Q8N126 398 aa9.23□□□□□ -0.93
SKA1-205ENST00000494518 ZNF114Q8NC26 417 aa9.23□□□□□ -0.93
SKA1-205ENST00000494518 TXN2Q99757 166 aa9.23□□□□□ -0.93
SKA1-205ENST00000494518 GINS3Q9BRX5 216 aa9.23□□□□□ -0.93
SKA1-205ENST00000494518 MFFQ9GZY8 342 aa9.23□□□□□ -0.93
SKA1-205ENST00000494518 RABAC1Q9UI14 185 aa9.23□□□□□ -0.93
SKA1-205ENST00000494518 PUS1Q9Y606 427 aaKnown RBP eCLIP9.23□□□□□ -0.93
SKA1-205ENST00000494518 M0QYG6 137 aa9.22□□□□□ -0.93
SKA1-205ENST00000494518 PI3P19957 117 aa9.22□□□□□ -0.93
SKA1-205ENST00000494518 HSPE1P61604 102 aaKnown RBP9.22□□□□□ -0.93
SKA1-205ENST00000494518 ERHP84090 104 aaKnown RBP9.22□□□□□ -0.93
SKA1-205ENST00000494518 CROCCP3Q8IVE0 287 aa9.22□□□□□ -0.93
SKA1-205ENST00000494518 GPX8Q8TED1 209 aa9.22□□□□□ -0.93
SKA1-205ENST00000494518 C2CD4CQ8TF44 421 aa9.22□□□□□ -0.93
SKA1-205ENST00000494518 VSIRQ9H7M9 311 aa9.22□□□□□ -0.93
SKA1-205ENST00000494518 COMMD3Q9UBI1 195 aa9.22□□□□□ -0.93
SKA1-205ENST00000494518 PKHD1P08F94 4074 aa9.21□□□□□ -0.93
SKA1-205ENST00000494518 A0A1B0GU03 582 aa9.21□□□□□ -0.94
SKA1-205ENST00000494518 IGLL5B9A064 214 aa9.21□□□□□ -0.94
SKA1-205ENST00000494518 ZNF600Q6ZNG1 722 aa9.21□□□□□ -0.94
SKA1-205ENST00000494518 STHQ8IWL8 128 aa9.21□□□□□ -0.94
SKA1-205ENST00000494518 SLC35G3Q8N808 338 aa9.21□□□□□ -0.94
SKA1-205ENST00000494518 DUSP18Q8NEJ0 188 aa9.21□□□□□ -0.94
SKA1-205ENST00000494518 STXBP6Q8NFX7 210 aa9.21□□□□□ -0.94
SKA1-205ENST00000494518 MRPL36Q9P0J6 103 aaKnown RBP9.21□□□□□ -0.94
SKA1-205ENST00000494518 PCLOQ9Y6V0 5065 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 IGHV4-28A0A0C4DH34 117 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 KNCNA6PVL3 124 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 TMEM127O75204 238 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 IGKV1-5P01602 117 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 PGAM2P15259 253 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 SNCAP37840 140 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 NPBWR1P48145 328 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 AKR1C2P52895 323 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 PPP5CP53041 499 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 KCTD21Q4G0X4 260 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 LPCAT3Q6P1A2 487 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 Q8NAQ8 132 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 YIPF6Q96EC8 236 aa9.2□□□□□ -0.94
SKA1-205ENST00000494518 A0A0B4J293 547 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms