RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 MOSP00540 346 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 MFAP2P55001 183 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 RAB31Q13636 194 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 NPBQ8NG41 125 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 OR2T6Q8NHC8 308 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 AJUBAQ96IF1 538 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 EAF1Q96JC9 268 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-225ENST00000494465 VAX2Q9UIW0 290 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 IGHV4-61A0A0C4DH41 118 aa13.19□□□□□ -0.3
ATG4B-225ENST00000494465 OOSP1A8MZH6 123 aa13.19□□□□□ -0.3
ATG4B-225ENST00000494465 NDUFA3O95167 84 aa13.19□□□□□ -0.3
ATG4B-225ENST00000494465 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.3
ATG4B-225ENST00000494465 GNB1P62873 340 aa13.19□□□□□ -0.3
ATG4B-225ENST00000494465 MMDQ15546 238 aa13.19□□□□□ -0.3
ATG4B-225ENST00000494465 TMEM249Q2WGJ8 235 aa13.19□□□□□ -0.3
ATG4B-225ENST00000494465 PIMREGQ9BSJ6 248 aa13.19□□□□□ -0.3
ATG4B-225ENST00000494465 NBR2O15453 112 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 C19orf35Q6ZS72 473 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 GATAD1Q8WUU5 269 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 LRRK2Q5S007 2527 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 CSMD1Q96PZ7 3565 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 SNRNP70P08621 437 aaKnown RBP13.18□□□□□ -0.3
ATG4B-225ENST00000494465 APELAP0DMC3 54 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 UBE2E1P51965 193 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 ATP5J2P56134 94 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 AWAT1Q58HT5 328 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 FAM90A2PQ658T7 463 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 CCDC144NLQ6NUI1 221 aa13.18□□□□□ -0.3
ATG4B-225ENST00000494465 SRSF12Q8WXF0 261 aaKnown RBP13.18□□□□□ -0.3
ATG4B-225ENST00000494465 MRPL36Q9P0J6 103 aaKnown RBP13.18□□□□□ -0.3
ATG4B-225ENST00000494465 A0A1W2PPV4 95 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 IFNA1P01562 189 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 OR10J1P30954 320 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 CD81P60033 236 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 RBMS3Q6XE24 437 aaKnown RBP13.17□□□□□ -0.3
ATG4B-225ENST00000494465 SLC35E3Q7Z769 313 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 ABHD5Q8WTS1 349 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 LPAR2Q9HBW0 351 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 FAM208BQ5VWN6 2430 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 NDUFS8O00217 210 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 CEBPGP53567 150 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 LGALS4P56470 323 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 Q8N6K4 173 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 NRGNQ92686 78 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 C20orf24Q9BUV8 137 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 SEPSECSQ9HD40 501 aaKnown RBP13.17□□□□□ -0.3
ATG4B-225ENST00000494465 TBL2Q9Y4P3 447 aaKnown RBP13.17□□□□□ -0.3
ATG4B-225ENST00000494465 CELSR2Q9HCU4 2923 aa13.17□□□□□ -0.3
ATG4B-225ENST00000494465 STAG3L2P0CL84 134 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 STAG3L3P0CL85 134 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 GATA2P23769 480 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-225ENST00000494465 MEF2BQ02080 365 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-225ENST00000494465 EBI3Q14213 229 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 PLGLAQ15195 96 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 RUSC1-AS1Q66K80 236 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 MRPL41Q8IXM3 137 aaKnown RBP13.16□□□□□ -0.3
ATG4B-225ENST00000494465 ACY3Q96HD9 319 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 SLC35E1Q96K37 410 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 MANBALQ9NQG1 85 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 DMRT1Q9Y5R6 373 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 FBN2P35556 2912 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 CSMD2Q7Z408 3487 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 IGHV4-30-2A0A087WSY4 118 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 C7orf77A4D0Y5 90 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 TSPAN4O14817 238 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 CRYGCP07315 174 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 SPATA31B1PQ5VZV4 182 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 OR2T10Q8NGZ9 312 aa13.16□□□□□ -0.3
ATG4B-225ENST00000494465 PUS1Q9Y606 427 aaKnown RBP eCLIP13.16□□□□□ -0.3
ATG4B-225ENST00000494465 IGKV1D-37A0A075B6S9 117 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 H3BQ15 152 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 AKR1C3P42330 323 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 HES1Q14469 280 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 CLEC2AQ6UVW9 174 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 OR1P1Q8NH06 330 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 F11RQ9Y624 299 aaKnown RBP13.15□□□□□ -0.3
ATG4B-225ENST00000494465 M0R036 132 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 ARL14EPLP0DKL9 152 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 PSMB3P49720 205 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 PAX8Q06710 450 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 C5orf64Q2M2E5 130 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 AKIRIN2Q53H80 203 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 THAP8Q8NA92 274 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 NPIPB3Q92617 1050 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 MALSU1Q96EH3 234 aa13.15□□□□□ -0.3
ATG4B-225ENST00000494465 SAA4P35542 130 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 IQCF2Q8IXL9 164 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 PERPQ96FX8 193 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 SRSF8Q9BRL6 282 aaKnown RBP13.14□□□□□ -0.31
ATG4B-225ENST00000494465 A1L4Q6 167 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 PAGE4O60829 102 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 PAX1P15863 534 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 TAGLN2P37802 199 aaKnown RBP13.14□□□□□ -0.31
ATG4B-225ENST00000494465 RHOBP62745 196 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 SPNS3Q6ZMD2 512 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 MISP3Q96FF7 219 aa13.14□□□□□ -0.31
ATG4B-225ENST00000494465 RPS10P5Q9NQ39 176 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms