RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 IGHV3-49A0A0A0MS15 119 aa12.27□□□□□ -0.45
PTPRU-208ENST00000493601 CD5P06127 495 aa12.27□□□□□ -0.45
PTPRU-208ENST00000493601 ELK1P19419 428 aa12.27□□□□□ -0.45
PTPRU-208ENST00000493601 APRG1Q8IVJ8 170 aa12.27□□□□□ -0.45
PTPRU-208ENST00000493601 ZNF486Q96H40 463 aaPredicted RBP12.27□□□□□ -0.45
PTPRU-208ENST00000493601 FUNDC2Q9BWH2 189 aa12.27□□□□□ -0.45
PTPRU-208ENST00000493601 M0QYG6 137 aa12.26□□□□□ -0.45
PTPRU-208ENST00000493601 HPGDSO60760 199 aa12.26□□□□□ -0.45
PTPRU-208ENST00000493601 IGHV3-48P01763 117 aa12.26□□□□□ -0.45
PTPRU-208ENST00000493601 PGAM2P15259 253 aa12.26□□□□□ -0.45
PTPRU-208ENST00000493601 TFPI2P48307 235 aa12.26□□□□□ -0.45
PTPRU-208ENST00000493601 RND3P61587 244 aa12.26□□□□□ -0.45
PTPRU-208ENST00000493601 VBP1P61758 197 aa12.26□□□□□ -0.45
PTPRU-208ENST00000493601 PAFAH1B2P68402 229 aa12.26□□□□□ -0.45
PTPRU-208ENST00000493601 SLC35G3Q8N808 338 aa12.26□□□□□ -0.45
PTPRU-208ENST00000493601 IGKV3-7A0A075B6H7 116 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 MPTX1A8MV57 137 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 ATG12O94817 140 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 SNCAP37840 140 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 NPBWR1P48145 328 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 RORCP51449 518 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 AKR1C2P52895 323 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 RNASE10Q5GAN6 216 aaKnown RBP12.25□□□□□ -0.45
PTPRU-208ENST00000493601 FAM90A2PQ658T7 463 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 MZT2AQ6P582 158 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 DUSP18Q8NEJ0 188 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 GATAD1Q8WUU5 269 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 CSTL1Q9H114 145 aa12.25□□□□□ -0.45
PTPRU-208ENST00000493601 FAM25AB3EWG3 89 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 FAM25CB3EWG5 89 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 FAM25GB3EWG6 89 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 TBPP20226 339 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 PIGPP57054 158 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 ZNF124Q15973 351 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 SPINK9Q5DT21 86 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 TCF24Q7RTU0 167 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 ARRDC1Q8N5I2 433 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 AP3S1Q92572 193 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 PDCD10Q9BUL8 212 aa12.24□□□□□ -0.45
PTPRU-208ENST00000493601 IGHV3OR16-13A0A075B7E8 117 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 IGHV3-74A0A0B4J1X5 117 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 INS-IGF2F8WCM5 200 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 CORTO00230 105 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 ST8SIA3O43173 380 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 IFNA17P01571 189 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 IGKV1-5P01602 117 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 PI3P19957 117 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 SUB1P53999 127 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPRU-208ENST00000493601 IZUMO4Q1ZYL8 232 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 RNASE12Q5GAN4 147 aaKnown RBP12.23□□□□□ -0.45
PTPRU-208ENST00000493601 TOMM20LQ6UXN7 152 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 ZNF600Q6ZNG1 722 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 LHFPL1Q86WI0 220 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 GBGT1Q8N5D6 347 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 TP53RKQ96S44 253 aa12.23□□□□□ -0.45
PTPRU-208ENST00000493601 C3orf85A0A1B0GTC6 90 aa12.22□□□□□ -0.45
PTPRU-208ENST00000493601 SCGB2A1O75556 95 aa12.22□□□□□ -0.45
PTPRU-208ENST00000493601 P0C879 139 aa12.22□□□□□ -0.45
PTPRU-208ENST00000493601 HOXA1P49639 335 aaPredicted RBP12.22□□□□□ -0.45
PTPRU-208ENST00000493601 RARRES2Q99969 163 aa12.22□□□□□ -0.45
PTPRU-208ENST00000493601 TMEM231Q9H6L2 316 aa12.22□□□□□ -0.45
PTPRU-208ENST00000493601 VSIRQ9H7M9 311 aa12.22□□□□□ -0.45
PTPRU-208ENST00000493601 KLK11Q9UBX7 282 aa12.22□□□□□ -0.45
PTPRU-208ENST00000493601 PUS1Q9Y606 427 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTPRU-208ENST00000493601 TRAV2A0A0B4J234 112 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 A0A0B4J293 547 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 DNASE2O00115 360 aaPredicted RBP12.21□□□□□ -0.45
PTPRU-208ENST00000493601 DFFBO76075 338 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 CD3DP04234 171 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 PPP5CP53041 499 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 TRIM16LQ309B1 348 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 CCDC71LQ8N9Z2 235 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 OR52I2Q8NH67 350 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 ZFAND1Q8TCF1 268 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.45
PTPRU-208ENST00000493601 MFFQ9GZY8 342 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 MS4A6AQ9H2W1 248 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 C11orf68Q9H3H3 251 aaKnown RBP12.21□□□□□ -0.45
PTPRU-208ENST00000493601 ZFAND3Q9H8U3 227 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 ENY2Q9NPA8 101 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 COPZ2Q9P299 210 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 MTFP1Q9UDX5 166 aa12.21□□□□□ -0.45
PTPRU-208ENST00000493601 B3GALNT1O75752 331 aa12.2□□□□□ -0.46
PTPRU-208ENST00000493601 CA1P00915 261 aaPredicted RBP12.2□□□□□ -0.46
PTPRU-208ENST00000493601 RPL11P62913 178 aaKnown RBP12.2□□□□□ -0.46
PTPRU-208ENST00000493601 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
PTPRU-208ENST00000493601 OR11H2Q8NH07 326 aa12.2□□□□□ -0.46
PTPRU-208ENST00000493601 RNASE11Q8TAA1 199 aaKnown RBP12.2□□□□□ -0.46
PTPRU-208ENST00000493601 C15orf40Q8WUR7 153 aa12.2□□□□□ -0.46
PTPRU-208ENST00000493601 RRNAD1Q96FB5 475 aaKnown RBP12.2□□□□□ -0.46
PTPRU-208ENST00000493601 EXTL2Q9UBQ6 330 aa12.2□□□□□ -0.46
PTPRU-208ENST00000493601 IGHV3-66A0A0C4DH42 116 aa12.19□□□□□ -0.46
PTPRU-208ENST00000493601 A0A1B0GU03 582 aa12.19□□□□□ -0.46
PTPRU-208ENST00000493601 GABARAPO95166 117 aa12.19□□□□□ -0.46
PTPRU-208ENST00000493601 TMEM50AO95807 157 aa12.19□□□□□ -0.46
PTPRU-208ENST00000493601 APOHP02749 345 aaPredicted RBP12.19□□□□□ -0.46
PTPRU-208ENST00000493601 RNASE2P10153 161 aaKnown RBP12.19□□□□□ -0.46
PTPRU-208ENST00000493601 OPRK1P41145 380 aa12.19□□□□□ -0.46
PTPRU-208ENST00000493601 OR13C8Q8NGS7 320 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms