RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RPP25LQ8N5L8 163 aaKnown RBP7.61□□□□□ -1.19
BRCA1-219ENST00000491747 RPUSD4Q96CM3 377 aaKnown RBP7.61□□□□□ -1.19
BRCA1-219ENST00000491747 ANAPC16Q96DE5 110 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 DUX5Q96PT3 197 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 C2orf88Q9BSF0 95 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 MANBALQ9NQG1 85 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 OR1A1Q9P1Q5 309 aa7.61□□□□□ -1.19
BRCA1-219ENST00000491747 CTXND1A0A1B0GTU2 59 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 A0A1W2PRD5 423 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 A0A1W2PRF3 423 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 A0A1W2PRM7 423 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 A8MWP6 167 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 M0R1W7 72 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 ST8SIA5O15466 376 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 IGLV2-14P01704 120 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 CEACAM6P40199 344 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 EDDM3BP56851 147 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 SCGB2A2Q13296 93 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 EDDM3AQ14507 147 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 SSX2Q16385 188 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 ACOT6Q3I5F7 207 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-219ENST00000491747 FIP1L1Q6UN15 594 aaKnown RBP7.6□□□□□ -1.19
BRCA1-219ENST00000491747 C1orf122Q6ZSJ8 110 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 NECAP1Q8NC96 275 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 TMEM170AQ8WVE7 144 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 PARLQ9H300 379 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 ATP6V1FQ16864 119 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 ZNF585BQ52M93 769 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 OR8G2PQ6IF36 304 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 TMEM14EPQ6UXP3 125 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 PRR18Q8N4B5 295 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 TMEM18Q96B42 140 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 TRAPPC2LQ9UL33 140 aa7.6□□□□□ -1.19
BRCA1-219ENST00000491747 A0A0U1RQK1 487 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 A0A1W2PPQ1 181 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 C17orf98A8MV24 154 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 PRTN3P24158 256 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 RAB4BP61018 213 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 TNFRSF9Q07011 255 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 AESQ08117 197 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 USF2Q15853 346 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-219ENST00000491747 KCNIP4Q6PIL6 250 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 ZNF664Q8N3J9 261 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-219ENST00000491747 BEND2Q8NDZ0 799 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 TMEM158Q8WZ71 300 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 COQ2Q96H96 371 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 NDUFAF3Q9BU61 184 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 C19orf24Q9BVV8 132 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 KIAA2026Q5HYC2 2103 aa7.59□□□□□ -1.19
BRCA1-219ENST00000491747 DNAJC9-AS1A6NH13 148 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 ZNF705GA8MUZ8 300 aaPredicted RBP7.59□□□□□ -1.2
BRCA1-219ENST00000491747 MGST3O14880 152 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 IGKV1D-33P01593 117 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 IGKV1-33P01594 117 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 MSMO1Q15800 293 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 OR10G9Q8NGN4 311 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 OR10G7Q8NGN6 311 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 OR2T10Q8NGZ9 312 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 OR4F5Q8NH21 305 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 AJUBAQ96IF1 538 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 BTF3L4Q96K17 158 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 OR4F4Q96R69 305 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 TMEM147Q9BVK8 224 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 SLC25A22Q9H936 323 aa7.59□□□□□ -1.2
BRCA1-219ENST00000491747 COL6A5A8TX70 2615 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 MMP23AO75900 390 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 TYMSP04818 313 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 GZMHP20718 246 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 BPIFB3P59826 476 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 MEF2CQ06413 473 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-219ENST00000491747 IQCJQ1A5X6 159 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 ACTL10Q5JWF8 245 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 ACSM6Q6P461 480 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 Q6YL49 198 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 DRAM1Q8N682 238 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 OR10P1Q8NGE3 313 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 MISP3Q96FF7 219 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 HSPB7Q9UBY9 170 aa7.58□□□□□ -1.2
BRCA1-219ENST00000491747 NPFFO15130 113 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 HOXA3O43365 443 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-219ENST00000491747 GGCTO75223 188 aaKnown RBP7.57□□□□□ -1.2
BRCA1-219ENST00000491747 UBE2E1P51965 193 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 ZNF497Q6ZNH5 498 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 ZNF709Q8N972 641 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 FUT9Q9Y231 359 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 HMGB3O15347 200 aaKnown RBP7.57□□□□□ -1.2
BRCA1-219ENST00000491747 SAA4P35542 130 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 SPCS3P61009 180 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 FFAR4Q5NUL3 377 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 MRPL41Q8IXM3 137 aaKnown RBP7.57□□□□□ -1.2
BRCA1-219ENST00000491747 ZBTB34Q8NCN2 500 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 TMEM37Q8WXS4 190 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 ZNF714Q96N38 554 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 CIB3Q96Q77 187 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-219ENST00000491747 ELOVL1Q9BW60 279 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 TNFRSF19Q9NS68 423 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 MBNL3Q9NUK0 354 aaKnown RBP7.57□□□□□ -1.2
BRCA1-219ENST00000491747 OR6C3Q9NZP0 311 aa7.57□□□□□ -1.2
BRCA1-219ENST00000491747 LINC00312Q9Y6C7 94 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms