RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 GALNT14Q96FL9 552 aa11.46□□□□□ -0.57
COL27A1-206ENST00000490831 ZNF414Q96IQ9 312 aa11.46□□□□□ -0.57
COL27A1-206ENST00000490831 SCGB3A2Q96PL1 93 aa11.46□□□□□ -0.57
COL27A1-206ENST00000490831 TXN2Q99757 166 aa11.46□□□□□ -0.57
COL27A1-206ENST00000490831 CHRDL1Q9BU40 450 aa11.46□□□□□ -0.57
COL27A1-206ENST00000490831 MRPL27Q9P0M9 148 aaKnown RBP11.46□□□□□ -0.57
COL27A1-206ENST00000490831 MLXQ9UH92 298 aa11.46□□□□□ -0.57
COL27A1-206ENST00000490831 TMEM56-RWDD3S4R434 201 aa11.46□□□□□ -0.57
COL27A1-206ENST00000490831 TENM3Q9P273 2699 aa11.46□□□□□ -0.58
COL27A1-206ENST00000490831 IGHV3-21A0A0B4J1V1 117 aa11.45□□□□□ -0.58
COL27A1-206ENST00000490831 CTSGP08311 255 aa11.45□□□□□ -0.58
COL27A1-206ENST00000490831 ETV6P41212 452 aa11.45□□□□□ -0.58
COL27A1-206ENST00000490831 ZNF57Q68EA5 555 aaPredicted RBP11.45□□□□□ -0.58
COL27A1-206ENST00000490831 SELENOHQ8IZQ5 122 aaKnown RBP11.45□□□□□ -0.58
COL27A1-206ENST00000490831 SLC35G3Q8N808 338 aa11.45□□□□□ -0.58
COL27A1-206ENST00000490831 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
COL27A1-206ENST00000490831 IL22RA2Q969J5 263 aa11.45□□□□□ -0.58
COL27A1-206ENST00000490831 TM2D3Q9BRN9 247 aa11.45□□□□□ -0.58
COL27A1-206ENST00000490831 TRAV25A0A0B4J276 109 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 IGHV3-35A0A0C4DH35 117 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 K7EMT4 169 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 MT-CO2P00403 227 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 IFNA17P01571 189 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 S100A5P33763 92 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 MFAP4P55083 255 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 AP3S2P59780 193 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 TMEM187Q14656 261 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 BSXQ3C1V8 233 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 SPINK9Q5DT21 86 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 LINC00322Q6ZN03 302 aaPredicted RBP11.44□□□□□ -0.58
COL27A1-206ENST00000490831 TMEM61Q8N0U2 210 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 MISP3Q96FF7 219 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 WDR89Q96FK6 387 aaPredicted RBP11.44□□□□□ -0.58
COL27A1-206ENST00000490831 NEURL2Q9BR09 285 aa11.44□□□□□ -0.58
COL27A1-206ENST00000490831 DAZ1Q9NQZ3 744 aaKnown RBP11.44□□□□□ -0.58
COL27A1-206ENST00000490831 CD7P09564 240 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 RNASE2P10153 161 aaKnown RBP11.43□□□□□ -0.58
COL27A1-206ENST00000490831 FAUP35544 74 aaKnown RBP11.43□□□□□ -0.58
COL27A1-206ENST00000490831 SNCAP37840 140 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 CD81P60033 236 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 SPCS3P61009 180 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 PYDC2Q56P42 97 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 Q56UQ5 140 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 RCHY1Q96PM5 261 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 PDCD10Q9BUL8 212 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.43□□□□□ -0.58
COL27A1-206ENST00000490831 MCUBQ9NWR8 336 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 KCNIP3Q9Y2W7 256 aa11.43□□□□□ -0.58
COL27A1-206ENST00000490831 C15orf62A8K5M9 175 aa11.42□□□□□ -0.58
COL27A1-206ENST00000490831 NUPL2O15504 423 aaKnown RBP11.42□□□□□ -0.58
COL27A1-206ENST00000490831 SUPT4H1P63272 117 aaKnown RBP11.42□□□□□ -0.58
COL27A1-206ENST00000490831 RELQ04864 619 aaPredicted RBP11.42□□□□□ -0.58
COL27A1-206ENST00000490831 GUCA2BQ16661 112 aa11.42□□□□□ -0.58
COL27A1-206ENST00000490831 TMEM268Q5VZI3 342 aa11.42□□□□□ -0.58
COL27A1-206ENST00000490831 BTNL8Q6UX41 500 aa11.42□□□□□ -0.58
COL27A1-206ENST00000490831 TOMM5Q8N4H5 51 aa11.42□□□□□ -0.58
COL27A1-206ENST00000490831 UBAC2Q8NBM4 344 aa11.42□□□□□ -0.58
COL27A1-206ENST00000490831 RNASE11Q8TAA1 199 aaKnown RBP11.42□□□□□ -0.58
COL27A1-206ENST00000490831 GPR146Q96CH1 333 aa11.42□□□□□ -0.58
COL27A1-206ENST00000490831 ZMAT4Q9H898 229 aa11.42□□□□□ -0.58
COL27A1-206ENST00000490831 CORTO00230 105 aa11.41□□□□□ -0.58
COL27A1-206ENST00000490831 HOXA1P49639 335 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-206ENST00000490831 SUB1P53999 127 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL27A1-206ENST00000490831 HAGHQ16775 308 aa11.41□□□□□ -0.58
COL27A1-206ENST00000490831 OR10C1Q96KK4 312 aa11.41□□□□□ -0.58
COL27A1-206ENST00000490831 TUBA4BQ9H853 241 aa11.41□□□□□ -0.58
COL27A1-206ENST00000490831 CACNG5Q9UF02 275 aa11.41□□□□□ -0.58
COL27A1-206ENST00000490831 CACFD1Q9UGQ2 172 aa11.41□□□□□ -0.58
COL27A1-206ENST00000490831 KMT2CQ8NEZ4 4911 aaKnown RBP11.4□□□□□ -0.58
COL27A1-206ENST00000490831 A0A0B4J2A0 478 aa11.4□□□□□ -0.58
COL27A1-206ENST00000490831 NMSQ5H8A3 153 aa11.4□□□□□ -0.58
COL27A1-206ENST00000490831 SPANXN2Q5MJ10 180 aa11.4□□□□□ -0.58
COL27A1-206ENST00000490831 SLC16A13Q7RTY0 426 aa11.4□□□□□ -0.58
COL27A1-206ENST00000490831 PINX1Q96BK5 328 aaKnown RBP11.4□□□□□ -0.58
COL27A1-206ENST00000490831 SLC25A21Q9BQT8 299 aaPredicted RBP11.4□□□□□ -0.58
COL27A1-206ENST00000490831 SRRQ9GZT4 340 aa11.4□□□□□ -0.58
COL27A1-206ENST00000490831 ENY2Q9NPA8 101 aa11.4□□□□□ -0.58
COL27A1-206ENST00000490831 SHPKQ9UHJ6 478 aa11.4□□□□□ -0.58
COL27A1-206ENST00000490831 OR11H12B2RN74 326 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 TSPAN4O14817 238 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 GNG7O60262 68 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 IGHV3-48P01763 117 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 AKR1C4P17516 323 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 HTR2BP41595 481 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 NPBWR1P48145 328 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 SRPXP78539 464 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 ANKRD55Q3KP44 614 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 DEFB125Q8N687 156 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 DUSP18Q8NEJ0 188 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 SPAG8Q99932 426 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-206ENST00000490831 FNDC4Q9H6D8 234 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-206ENST00000490831 SELENOKQ9Y6D0 94 aa11.39□□□□□ -0.59
COL27A1-206ENST00000490831 DNAH7Q8WXX0 4024 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 PIGBOS1A0A0B4J2F0 54 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 SCAF4O95104 1147 aaKnown RBP11.38□□□□□ -0.59
COL27A1-206ENST00000490831 SULT1A3P0DMM9 295 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 SULT1A4P0DMN0 295 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 ANXA3P12429 323 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 C2orf83Q53S99 150 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 TMEM128Q5BJH2 165 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms