RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 NMSQ5H8A3 153 aa11.68□□□□□ -0.54
VPS26A-207ENST00000490696 PVRIGQ6DKI7 326 aa11.68□□□□□ -0.54
VPS26A-207ENST00000490696 PLET1Q6UQ28 207 aa11.68□□□□□ -0.54
VPS26A-207ENST00000490696 LINC00299Q6ZSB3 139 aa11.68□□□□□ -0.54
VPS26A-207ENST00000490696 LYZL2Q7Z4W2 148 aa11.68□□□□□ -0.54
VPS26A-207ENST00000490696 LGI3Q8N145 548 aa11.68□□□□□ -0.54
VPS26A-207ENST00000490696 MISP3Q96FF7 219 aa11.68□□□□□ -0.54
VPS26A-207ENST00000490696 BSCL2Q96G97 398 aaPredicted RBP11.68□□□□□ -0.54
VPS26A-207ENST00000490696 SHPKQ9UHJ6 478 aa11.68□□□□□ -0.54
VPS26A-207ENST00000490696 NBEAL2Q6ZNJ1 2754 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 LINC00854A0A1B0GVQ3 168 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 C2orf70A6NJV1 201 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 A8MWP6 167 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 NDUFB6O95139 128 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 SULT1A3P0DMM9 295 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 SULT1A4P0DMN0 295 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 RNASE2P10153 161 aaKnown RBP11.67□□□□□ -0.54
VPS26A-207ENST00000490696 EDN2P20800 178 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 BTCP35070 178 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 SNCAP37840 140 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 HOXA1P49639 335 aaPredicted RBP11.67□□□□□ -0.54
VPS26A-207ENST00000490696 FAM106AQ4KMX7 169 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 UNQ9165/PRO28630Q6UXU0 137 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 CENPSQ8N2Z9 138 aa11.67□□□□□ -0.54
VPS26A-207ENST00000490696 C7orf50Q9BRJ6 194 aaKnown RBP11.67□□□□□ -0.54
VPS26A-207ENST00000490696 ZNF436Q9C0F3 470 aaPredicted RBP11.67□□□□□ -0.54
VPS26A-207ENST00000490696 IGHV3-35A0A0C4DH35 117 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 TMEM213A2RRL7 107 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 SFT2D2O95562 160 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 MT-CO2P00403 227 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 VAMP1P23763 118 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 FCGR2BP31994 310 aaPredicted RBP11.66□□□□□ -0.54
VPS26A-207ENST00000490696 ADMP35318 185 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 PPP1R1AQ13522 171 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 BSXQ3C1V8 233 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 ANKRD55Q3KP44 614 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 SPSB3Q6PJ21 355 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 LRTM2Q8N967 370 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 CHRDL1Q9BU40 450 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 ENY2Q9NPA8 101 aa11.66□□□□□ -0.54
VPS26A-207ENST00000490696 PIGBOS1A0A0B4J2F0 54 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 DUXBA0A1W2PPF3 345 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 ZNF320A2RRD8 509 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 PLA2G10O15496 165 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 FOLR2P14207 255 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 SUB1P53999 127 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS26A-207ENST00000490696 UBE2MP61081 183 aaKnown RBP11.65□□□□□ -0.54
VPS26A-207ENST00000490696 SMCO1Q147U7 214 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 Q56UQ5 140 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 UBAC2Q8NBM4 344 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 PINX1Q96BK5 328 aaKnown RBP11.65□□□□□ -0.54
VPS26A-207ENST00000490696 ZNF414Q96IQ9 312 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 CACFD1Q9UGQ2 172 aa11.65□□□□□ -0.54
VPS26A-207ENST00000490696 KMT2CQ8NEZ4 4911 aaKnown RBP11.64□□□□□ -0.55
VPS26A-207ENST00000490696 IZUMO1RA6ND01 250 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 CENPXA8MT69 81 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 IGHV3-48P01763 117 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 CTSGP08311 255 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 CBLN1P23435 193 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 MFAP4P55083 255 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 DEFB114Q30KQ6 69 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 CD300EQ496F6 205 aaPredicted RBP11.64□□□□□ -0.55
VPS26A-207ENST00000490696 TM4SF20Q53R12 229 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 OR2K2Q8NGT1 345 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 CACNG8Q8WXS5 425 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 TMEM190Q8WZ59 177 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 TXN2Q99757 166 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 B9D2Q9BPU9 175 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 GAR1Q9NY12 217 aaKnown RBP11.64□□□□□ -0.55
VPS26A-207ENST00000490696 FLVCR2Q9UPI3 526 aa11.64□□□□□ -0.55
VPS26A-207ENST00000490696 A0A1B0GU03 582 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 CEBPZOSA8MTT3 80 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 CORTO00230 105 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 NXPH3O95157 252 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 C8orf88P0DMB2 117 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 HTR2BP41595 481 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 ELLP55199 621 aaPredicted RBP11.63□□□□□ -0.55
VPS26A-207ENST00000490696 TNFRSF9Q07011 255 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 LCN12Q6JVE5 192 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 Q8N1Y9 231 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 DYNLRB2Q8TF09 96 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 CCDC32Q9BV29 185 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 PALMDQ9NP74 551 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
VPS26A-207ENST00000490696 TECRQ9NZ01 308 aaKnown RBP11.63□□□□□ -0.55
VPS26A-207ENST00000490696 HSPB7Q9UBY9 170 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 SMAD5-AS1Q9Y6J3 95 aa11.63□□□□□ -0.55
VPS26A-207ENST00000490696 NDUFA4O00483 81 aa11.62□□□□□ -0.55
VPS26A-207ENST00000490696 LYRM1O43325 122 aa11.62□□□□□ -0.55
VPS26A-207ENST00000490696 PITX3O75364 302 aa11.62□□□□□ -0.55
VPS26A-207ENST00000490696 C2orf83Q53S99 150 aa11.62□□□□□ -0.55
VPS26A-207ENST00000490696 C11orf87Q6NUJ2 197 aa11.62□□□□□ -0.55
VPS26A-207ENST00000490696 UXS1Q8NBZ7 420 aa11.62□□□□□ -0.55
VPS26A-207ENST00000490696 S100ZQ8WXG8 99 aa11.62□□□□□ -0.55
VPS26A-207ENST00000490696 FNDC4Q9H6D8 234 aaPredicted RBP11.62□□□□□ -0.55
VPS26A-207ENST00000490696 PTTG2Q9NZH5 202 aa11.62□□□□□ -0.55
VPS26A-207ENST00000490696 UFC1Q9Y3C8 167 aa11.62□□□□□ -0.55
VPS26A-207ENST00000490696 DNAH9Q9NYC9 4486 aa11.61□□□□□ -0.55
VPS26A-207ENST00000490696 COL7A1Q02388 2944 aa11.61□□□□□ -0.55
VPS26A-207ENST00000490696 C9orf170A2RU37 121 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms