RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 TMEM116Q8NCL8 245 aa8.35□□□□□ -1.07
DUBR-204ENST00000490441 GALNT14Q96FL9 552 aa8.35□□□□□ -1.07
DUBR-204ENST00000490441 CMTM3Q96MX0 182 aa8.35□□□□□ -1.07
DUBR-204ENST00000490441 SMPXQ9UHP9 88 aa8.35□□□□□ -1.07
DUBR-204ENST00000490441 IGHV7-4-1A0A0J9YVY3 117 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 GNG7O60262 68 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 MT-CO2P00403 227 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 CTSGP08311 255 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 PGAM2P15259 253 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 FCGR2BP31994 310 aaPredicted RBP8.34□□□□□ -1.07
DUBR-204ENST00000490441 UCP3P55916 312 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 PRCDQ00LT1 54 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 ZNF114Q8NC26 417 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 LINC00476Q8WZB0 136 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 MRGPRFQ96AM1 343 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 PINX1Q96BK5 328 aaKnown RBP8.34□□□□□ -1.07
DUBR-204ENST00000490441 SEC22AQ96IW7 307 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 TXN2Q99757 166 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 GINS3Q9BRX5 216 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 RHPN1-AS1Q9BWJ2 59 aa8.34□□□□□ -1.07
DUBR-204ENST00000490441 IGKV3-7A0A075B6H7 116 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 IGHV3-49A0A0A0MS15 119 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 TRAV14DV4A0A0A6YYC5 116 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 FAM25AB3EWG3 89 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 FAM25CB3EWG5 89 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 FAM25GB3EWG6 89 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 I3L2K1 104 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 CHEK1O14757 476 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 ATG12O94817 140 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 LY6G6CO95867 125 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 TFPI2P48307 235 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 AKR1C2P52895 323 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 HSPE1P61604 102 aaKnown RBP8.33□□□□□ -1.08
DUBR-204ENST00000490441 VBP1P61758 197 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 NCS1P62166 190 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 MZT2AQ6P582 158 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 RNF183Q96D59 192 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 RNF2Q99496 336 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 PDCD10Q9BUL8 212 aa8.33□□□□□ -1.08
DUBR-204ENST00000490441 NXF2Q9GZY0 626 aaKnown RBP8.33□□□□□ -1.08
DUBR-204ENST00000490441 KLK5Q9Y337 293 aaPredicted RBP8.33□□□□□ -1.08
DUBR-204ENST00000490441 M0QYG6 137 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 HPGDSO60760 199 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 IGKV1-39P01597 117 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 IGHV3-48P01763 117 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 IGKV1D-39P04432 117 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 CD5P06127 495 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 ELK1P19419 428 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 SNCAP37840 140 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 NPBWR1P48145 328 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 RORCP51449 518 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 PAFAH1B2P68402 229 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 RNASE12Q5GAN4 147 aaKnown RBP8.32□□□□□ -1.08
DUBR-204ENST00000490441 RNASE10Q5GAN6 216 aaKnown RBP8.32□□□□□ -1.08
DUBR-204ENST00000490441 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 CEMP1Q6PRD7 247 aaPredicted RBP8.32□□□□□ -1.08
DUBR-204ENST00000490441 APRG1Q8IVJ8 170 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 LILRB2Q8N423 598 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 SLC35G3Q8N808 338 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 DUSP18Q8NEJ0 188 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 AP3S1Q92572 193 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 ZNF486Q96H40 463 aaPredicted RBP8.32□□□□□ -1.08
DUBR-204ENST00000490441 OR10C1Q96KK4 312 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 FUNDC2Q9BWH2 189 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 MAP6D1Q9H9H5 199 aa8.32□□□□□ -1.08
DUBR-204ENST00000490441 IGHV3OR16-13A0A075B7E8 117 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 IGHV3-74A0A0B4J1X5 117 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 MPTX1A8MV57 137 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 SCGB2A1O75556 95 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 IFNA17P01571 189 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 PIGPP57054 158 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 RND3P61587 244 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 SPINK9Q5DT21 86 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 TCF24Q7RTU0 167 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 GBGT1Q8N5D6 347 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 RNASE11Q8TAA1 199 aaKnown RBP8.31□□□□□ -1.08
DUBR-204ENST00000490441 CSTL1Q9H114 145 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 ENY2Q9NPA8 101 aa8.31□□□□□ -1.08
DUBR-204ENST00000490441 DNASE2O00115 360 aaPredicted RBP8.3□□□□□ -1.08
DUBR-204ENST00000490441 CORTO00230 105 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 ST8SIA3O43173 380 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 PI3P19957 117 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 TBPP20226 339 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 HOXA1P49639 335 aaPredicted RBP8.3□□□□□ -1.08
DUBR-204ENST00000490441 SUB1P53999 127 aaKnown RBP eCLIP8.3□□□□□ -1.08
DUBR-204ENST00000490441 RPL11P62913 178 aaKnown RBP8.3□□□□□ -1.08
DUBR-204ENST00000490441 EWSR1Q01844 656 aaKnown RBP eCLIP8.3□□□□□ -1.08
DUBR-204ENST00000490441 IZUMO4Q1ZYL8 232 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 TRIM16LQ309B1 348 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 TOMM20LQ6UXN7 152 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 ZNF600Q6ZNG1 722 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 ARRDC1Q8N5I2 433 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 CCDC71LQ8N9Z2 235 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 GATAD1Q8WUU5 269 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 RRNAD1Q96FB5 475 aaKnown RBP8.3□□□□□ -1.08
DUBR-204ENST00000490441 TMEM231Q9H6L2 316 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 COPZ2Q9P299 210 aa8.3□□□□□ -1.08
DUBR-204ENST00000490441 PPP5CP53041 499 aa8.29□□□□□ -1.08
DUBR-204ENST00000490441 ZNF124Q15973 351 aa8.29□□□□□ -1.08
DUBR-204ENST00000490441 FAM90A2PQ658T7 463 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms