RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 GNG7O60262 68 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 TMEM127O75204 238 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 NAT1P18440 290 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 TAS2R20P59543 309 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 TMEM187Q14656 261 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 UBE2NLQ5JXB2 153 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 TMEM69Q5SWH9 247 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 LEMD1Q68G75 181 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 TOMM20LQ6UXN7 152 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 OR4A16Q8NH70 328 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 SEC22AQ96IW7 307 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 YTHDF1Q9BYJ9 559 aaKnown RBP11.58□□□□□ -0.56
PLOD3-216ENST00000489927 MS4A6AQ9H2W1 248 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 VSIRQ9H7M9 311 aa11.58□□□□□ -0.56
PLOD3-216ENST00000489927 IGHV3-66A0A0C4DH42 116 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 ST8SIA3O43173 380 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 DFFBO76075 338 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 CD5P06127 495 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 HRH1P35367 487 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 TCTAP57738 103 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 DEFB131AP59861 70 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 PRCDQ00LT1 54 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 NEDD8Q15843 81 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 LYSMD2Q8IV50 215 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 FAM24BQ8N5W8 94 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 GINS3Q9BRX5 216 aa11.57□□□□□ -0.56
PLOD3-216ENST00000489927 IGLL5B9A064 214 aa11.56□□□□□ -0.56
PLOD3-216ENST00000489927 DNASE2O00115 360 aaPredicted RBP11.56□□□□□ -0.56
PLOD3-216ENST00000489927 EIF4EP06730 217 aaKnown RBP11.56□□□□□ -0.56
PLOD3-216ENST00000489927 HLA-DMAP28067 261 aa11.56□□□□□ -0.56
PLOD3-216ENST00000489927 TGFBR1P36897 503 aa11.56□□□□□ -0.56
PLOD3-216ENST00000489927 RPL11P62913 178 aaKnown RBP11.56□□□□□ -0.56
PLOD3-216ENST00000489927 H2BFWTQ7Z2G1 175 aa11.56□□□□□ -0.56
PLOD3-216ENST00000489927 TBC1D26Q86UD7 250 aa11.56□□□□□ -0.56
PLOD3-216ENST00000489927 SAMD12Q8N8I0 201 aa11.56□□□□□ -0.56
PLOD3-216ENST00000489927 Q8NAQ8 132 aa11.56□□□□□ -0.56
PLOD3-216ENST00000489927 ZFAND3Q9H8U3 227 aa11.56□□□□□ -0.56
PLOD3-216ENST00000489927 FAM212BQ9NTI7 297 aaPredicted RBP11.56□□□□□ -0.56
PLOD3-216ENST00000489927 APLNQ9ULZ1 77 aa11.56□□□□□ -0.56
PLOD3-216ENST00000489927 FAT2Q9NYQ8 4349 aa11.55□□□□□ -0.56
PLOD3-216ENST00000489927 PRSS3P35030 304 aa11.55□□□□□ -0.56
PLOD3-216ENST00000489927 HSPE1P61604 102 aaKnown RBP11.55□□□□□ -0.56
PLOD3-216ENST00000489927 SPINK9Q5DT21 86 aa11.55□□□□□ -0.56
PLOD3-216ENST00000489927 CROCCP3Q8IVE0 287 aa11.55□□□□□ -0.56
PLOD3-216ENST00000489927 MRGPRFQ96AM1 343 aa11.55□□□□□ -0.56
PLOD3-216ENST00000489927 PUS1Q9Y606 427 aaKnown RBP eCLIP11.55□□□□□ -0.56
PLOD3-216ENST00000489927 DNAH2Q9P225 4427 aa11.55□□□□□ -0.56
PLOD3-216ENST00000489927 TRAV2A0A0B4J234 112 aa11.54□□□□□ -0.56
PLOD3-216ENST00000489927 A0A1B0GU03 582 aa11.54□□□□□ -0.56
PLOD3-216ENST00000489927 S100GP29377 79 aa11.54□□□□□ -0.56
PLOD3-216ENST00000489927 TSPAN5P62079 268 aa11.54□□□□□ -0.56
PLOD3-216ENST00000489927 ERHP84090 104 aaKnown RBP11.54□□□□□ -0.56
PLOD3-216ENST00000489927 LPCAT3Q6P1A2 487 aa11.54□□□□□ -0.56
PLOD3-216ENST00000489927 STHQ8IWL8 128 aa11.54□□□□□ -0.56
PLOD3-216ENST00000489927 DUSP18Q8NEJ0 188 aa11.54□□□□□ -0.56
PLOD3-216ENST00000489927 HRH4Q9H3N8 390 aa11.54□□□□□ -0.56
PLOD3-216ENST00000489927 Q9H521 79 aa11.54□□□□□ -0.56
PLOD3-216ENST00000489927 IGHV4-28A0A0C4DH34 117 aa11.53□□□□□ -0.56
PLOD3-216ENST00000489927 C11orf94C9JXX5 98 aa11.53□□□□□ -0.56
PLOD3-216ENST00000489927 GIG44P09565 113 aaPredicted RBP11.53□□□□□ -0.56
PLOD3-216ENST00000489927 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
PLOD3-216ENST00000489927 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
PLOD3-216ENST00000489927 RPS19P39019 145 aaKnown RBP11.53□□□□□ -0.56
PLOD3-216ENST00000489927 NPBWR1P48145 328 aa11.53□□□□□ -0.56
PLOD3-216ENST00000489927 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
PLOD3-216ENST00000489927 IZUMO4Q1ZYL8 232 aa11.53□□□□□ -0.56
PLOD3-216ENST00000489927 ZNF600Q6ZNG1 722 aa11.53□□□□□ -0.56
PLOD3-216ENST00000489927 RABAC1Q9UI14 185 aa11.53□□□□□ -0.56
PLOD3-216ENST00000489927 TMEM50AO95807 157 aa11.52□□□□□ -0.57
PLOD3-216ENST00000489927 TRPT1Q86TN4 253 aaKnown RBP11.52□□□□□ -0.57
PLOD3-216ENST00000489927 GPX8Q8TED1 209 aa11.52□□□□□ -0.57
PLOD3-216ENST00000489927 ATP6V1G2O95670 118 aa11.51□□□□□ -0.57
PLOD3-216ENST00000489927 HLA-DMBP28068 263 aa11.51□□□□□ -0.57
PLOD3-216ENST00000489927 SNCAP37840 140 aa11.51□□□□□ -0.57
PLOD3-216ENST00000489927 UCP3P55916 312 aa11.51□□□□□ -0.57
PLOD3-216ENST00000489927 Q6ZTC4 211 aa11.51□□□□□ -0.57
PLOD3-216ENST00000489927 TMEM231Q9H6L2 316 aa11.51□□□□□ -0.57
PLOD3-216ENST00000489927 RYR1P21817 5038 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 A0A0B4J293 547 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 ZNF705EA8MWA4 302 aaPredicted RBP11.5□□□□□ -0.57
PLOD3-216ENST00000489927 K7EQG2 157 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 IGKV1-5P01602 117 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 MIFP14174 115 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 C4BPBP20851 252 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 NPPCP23582 126 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 PVRIGQ6DKI7 326 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 STXBP6Q8NFX7 210 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 MRPL36Q9P0J6 103 aaKnown RBP11.5□□□□□ -0.57
PLOD3-216ENST00000489927 X6R8D5 127 aa11.5□□□□□ -0.57
PLOD3-216ENST00000489927 DNAH17Q9UFH2 4485 aa11.49□□□□□ -0.57
PLOD3-216ENST00000489927 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
PLOD3-216ENST00000489927 A0A1W2PS18 150 aa11.49□□□□□ -0.57
PLOD3-216ENST00000489927 KNCNA6PVL3 124 aa11.49□□□□□ -0.57
PLOD3-216ENST00000489927 INS-IGF2F8WCM5 200 aa11.49□□□□□ -0.57
PLOD3-216ENST00000489927 SPP1P10451 314 aa11.49□□□□□ -0.57
PLOD3-216ENST00000489927 PPP5CP53041 499 aa11.49□□□□□ -0.57
PLOD3-216ENST00000489927 LSM3P62310 102 aaKnown RBP11.49□□□□□ -0.57
PLOD3-216ENST00000489927 TMEM41BQ5BJD5 291 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms