RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 PHYHIPLQ96FC7 376 aa6.16□□□□□ -1.42
SMC6-209ENST00000489535 NDUFA4L2Q9NRX3 87 aa6.16□□□□□ -1.42
SMC6-209ENST00000489535 CENPEQ02224 2701 aa6.16□□□□□ -1.42
SMC6-209ENST00000489535 PDZD2O15018 2839 aa6.16□□□□□ -1.42
SMC6-209ENST00000489535 HELZ2Q9BYK8 2649 aaKnown RBP6.15□□□□□ -1.42
SMC6-209ENST00000489535 CELSR1Q9NYQ6 3014 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 ABCA1O95477 2261 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 A0A0U1RQK1 487 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 UBE2L5PA0A1B0GUS4 154 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 CGB1A6NKQ9 187 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 NCBP2LA6PVI3 153 aaKnown RBP6.15□□□□□ -1.42
SMC6-209ENST00000489535 ACTL6BO94805 426 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 SCAF4O95104 1147 aaKnown RBP6.15□□□□□ -1.42
SMC6-209ENST00000489535 CA2P00918 260 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 IFNA5P01569 189 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 NPY1RP25929 384 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 RAB14P61106 215 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 RAB11AP62491 216 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 ERHP84090 104 aaKnown RBP6.15□□□□□ -1.42
SMC6-209ENST00000489535 ATP6V1FQ16864 119 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 KLF17Q5JT82 389 aaPredicted RBP6.15□□□□□ -1.42
SMC6-209ENST00000489535 FAM74A1Q5RGS3 127 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 STPG2Q8N412 459 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 Q8N6K4 173 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 WFDC11Q8NEX6 87 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 OR10P1Q8NGE3 313 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 OR10W1Q8NGF6 305 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 TMED6Q8WW62 240 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 PINX1Q96BK5 328 aaKnown RBP6.15□□□□□ -1.42
SMC6-209ENST00000489535 GINS3Q9BRX5 216 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 ARV1Q9H2C2 271 aa6.15□□□□□ -1.42
SMC6-209ENST00000489535 PTPN13Q12923 2485 aa6.15□□□□□ -1.43
SMC6-209ENST00000489535 POLQO75417 2590 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 ABCA12Q86UK0 2595 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 A0A1B0GW64 132 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 RPS10-NUDT3A0A1W2PQS6 291 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 FCN1O00602 326 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 IFNA4P05014 189 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 FAM106CPP0CH98 169 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 RNASE2P10153 161 aaKnown RBP6.14□□□□□ -1.43
SMC6-209ENST00000489535 ATP6V0CP27449 155 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 SNCAP37840 140 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 COMPP49747 757 aaPredicted RBP6.14□□□□□ -1.43
SMC6-209ENST00000489535 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
SMC6-209ENST00000489535 RUNX1Q01196 453 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 NDUFA5Q16718 116 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 C5orf64Q2M2E5 130 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 CLLU1Q5K131 121 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 CYB5R2Q6BCY4 276 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 EIF5AL1Q6IS14 154 aaKnown RBP6.14□□□□□ -1.43
SMC6-209ENST00000489535 Q6YL49 198 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 SCGB1C1Q8TD33 95 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 ABHD5Q8WTS1 349 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 TMEM170AQ8WVE7 144 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 FAM210AQ96ND0 272 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 FOXC2Q99958 501 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 TMEM147Q9BVK8 224 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 SLC25A32Q9H2D1 315 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 C1RLQ9NZP8 487 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 FAM96BQ9Y3D0 163 aa6.14□□□□□ -1.43
SMC6-209ENST00000489535 SMCO3A2RU48 225 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 PRSS46E5RG02 174 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 INS-IGF2F8WCM5 200 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 CNIH1O95406 144 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 REG1AP05451 166 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 FBP1P09467 338 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 SEC11BP0C7V7 166 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 APELAP0DMC3 54 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 OR13C7P0DN81 318 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 SPP1P10451 314 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 DLK1P80370 383 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 SSBP2P81877 361 aaPredicted RBP6.13□□□□□ -1.43
SMC6-209ENST00000489535 WT1-ASQ06250 92 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 LRRC75BQ2VPJ9 315 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 BSXQ3C1V8 233 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 C2orf83Q53S99 150 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 TMEM182Q6ZP80 229 aaPredicted RBP6.13□□□□□ -1.43
SMC6-209ENST00000489535 Q8N9W7 124 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 OR2G3Q8NGZ4 309 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 SRSF12Q8WXF0 261 aaKnown RBP6.13□□□□□ -1.43
SMC6-209ENST00000489535 GNPNAT1Q96EK6 184 aaPredicted RBP6.13□□□□□ -1.43
SMC6-209ENST00000489535 SSX3Q99909 188 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 PARD6GQ9BYG4 376 aaPredicted RBP6.13□□□□□ -1.43
SMC6-209ENST00000489535 SH3BGRL3Q9H299 93 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 UQCC1Q9NVA1 299 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 RFNGQ9Y644 331 aa6.13□□□□□ -1.43
SMC6-209ENST00000489535 SOX21Q9Y651 276 aaPredicted RBP6.13□□□□□ -1.43
SMC6-209ENST00000489535 MDFIC2A0A1B0GVS7 189 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 IGLC7A0M8Q6 106 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 TEX22C9J3V5 150 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 H3BUX3 64 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 FGF16O43320 207 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 NMBP08949 121 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 AREGP15514 252 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 FGF7P21781 194 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 SULT1A2P50226 295 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 SUB1P53999 127 aaKnown RBP eCLIP6.12□□□□□ -1.43
SMC6-209ENST00000489535 ATP5IP56385 69 aaPredicted RBP6.12□□□□□ -1.43
SMC6-209ENST00000489535 FXYD3Q14802 87 aa6.12□□□□□ -1.43
SMC6-209ENST00000489535 VWC2Q2TAL6 325 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms