RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CLN5O75503 358 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 PLAUP00749 431 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 CA2P00918 260 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 IGHV2-70P01814 119 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 OPN1MWP04001 364 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 IGKV1-16P04430 117 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 RNASE1P07998 156 aaKnown RBP6.85□□□□□ -1.31
VTI1A-207ENST00000489357 FBP1P09467 338 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 STAG3L2P0CL84 134 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 STAG3L3P0CL85 134 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 SAA1P0DJI8 122 aaPredicted RBP6.85□□□□□ -1.31
VTI1A-207ENST00000489357 OPN1MW2P0DN77 364 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 OPN1MW3P0DN78 364 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 CD99P14209 185 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 CD81P60033 236 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 PAX2Q02962 417 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 TMEM241Q24JQ0 296 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 VMA21Q3ZAQ7 101 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 VKORC1L1Q8N0U8 176 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 TEX45Q8NA69 505 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 LEAP2Q969E1 77 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 MBD6Q96DN6 1003 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 TIMD4Q96H15 378 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 MGST2Q99735 147 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 SRSF8Q9BRL6 282 aaKnown RBP6.85□□□□□ -1.31
VTI1A-207ENST00000489357 MRPL20Q9BYC9 149 aaKnown RBP6.85□□□□□ -1.31
VTI1A-207ENST00000489357 SLC25A22Q9H936 323 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 NDUFA4L2Q9NRX3 87 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 CBLN4Q9NTU7 201 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 DCAF16Q9NXF7 216 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 DOK5Q9P104 306 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 PXMP4Q9Y6I8 212 aa6.85□□□□□ -1.31
VTI1A-207ENST00000489357 AKAP9Q99996 3911 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 YLPM1P49750 1951 aaKnown RBP6.84□□□□□ -1.31
VTI1A-207ENST00000489357 MED13LQ71F56 2210 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 TRAV3A0A0B4J244 114 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 TEX50A0A1B0GTY4 177 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 A0A1W2PPE3 182 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 CORTO00230 105 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 IGLV1-47P01700 117 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 PAX1P15863 534 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 CCL3L1P16619 93 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 ERVFRD-1P60508 538 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 B2MP61769 119 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 ETFRF1Q6IPR1 90 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 LYPD2Q6UXB3 125 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 C1orf122Q6ZSJ8 110 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 SSX7Q7RTT5 188 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 ABHD12Q8N2K0 398 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 ZNF114Q8NC26 417 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 LY6G5BQ8NDX9 201 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 OR8B3Q8NGG8 313 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 TMEM170AQ8WVE7 144 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 OR8B2Q96RD0 313 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 SMIM7Q9BQ49 75 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 TCEAL7Q9BRU2 100 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 CLEC7AQ9BXN2 247 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 MRPL32Q9BYC8 188 aaKnown RBP6.84□□□□□ -1.31
VTI1A-207ENST00000489357 ITPR3Q14573 2671 aa6.84□□□□□ -1.31
VTI1A-207ENST00000489357 F8P00451 2351 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 OTOGQ6ZRI0 2925 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 M0R1W7 72 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 OVOL3O00110 214 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 PPP1R2P9O14990 202 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 FCN3O75636 299 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 YIF1AO95070 293 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 IGHV3-7P01780 117 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 S100A8P05109 93 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 S100A6P06703 90 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 LIPFP07098 398 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 RNASE2P10153 161 aaKnown RBP6.83□□□□□ -1.32
VTI1A-207ENST00000489357 AREGP15514 252 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 FGF8P55075 233 aaPredicted RBP6.83□□□□□ -1.32
VTI1A-207ENST00000489357 TAS2R45P59539 299 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 SELENOTP62341 195 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 CD69Q07108 199 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 SMUG1Q53HV7 270 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 SPINK9Q5DT21 86 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 UTF1Q5T230 341 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 PVRIGQ6DKI7 326 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 ZNF841Q6ZN19 808 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 PQLC2Q6ZP29 291 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 DTX2Q86UW9 622 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 MMD2Q8IY49 270 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 ZCCHC24Q8N2G6 241 aaKnown RBP6.83□□□□□ -1.32
VTI1A-207ENST00000489357 C11orf42Q8N5U0 333 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 IMMP2LQ96T52 175 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 C20orf24Q9BUV8 137 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 TMEM167BQ9NRX6 74 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 METTL1Q9UBP6 276 aaKnown RBP6.83□□□□□ -1.32
VTI1A-207ENST00000489357 SLC45A2Q9UMX9 530 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 LY96Q9Y6Y9 160 aa6.83□□□□□ -1.32
VTI1A-207ENST00000489357 IGHV2-26A0A0B4J1V2 119 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 SRRM4A7MD48 611 aaKnown RBP6.82□□□□□ -1.32
VTI1A-207ENST00000489357 C11orf94C9JXX5 98 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 IGLV2-23P01705 113 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 S100PP25815 95 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 CEACAM3P40198 252 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 CEBPGP53567 150 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms