RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 COLCA2A8K830 154 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 RBMXL2O75526 392 aaKnown RBP15.43■□□□□ 0.06
CCM2-216ENST00000488727 OR13C7P0DN81 318 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 CTRB1P17538 263 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 MDKP21741 143 aaPredicted RBP15.43■□□□□ 0.06
CCM2-216ENST00000488727 SPCS3P61009 180 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 PMS2P11Q13670 270 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 HAGHQ16775 308 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 CTRB2Q6GPI1 263 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 TMEM219Q86XT9 240 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 RCC1LQ96I51 464 aaKnown RBP15.43■□□□□ 0.06
CCM2-216ENST00000488727 AIFM2Q9BRQ8 373 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 RPS10P5Q9NQ39 176 aa15.43■□□□□ 0.06
CCM2-216ENST00000488727 A6NDX4 124 aa15.42■□□□□ 0.06
CCM2-216ENST00000488727 IGKV1D-33P01593 117 aa15.42■□□□□ 0.06
CCM2-216ENST00000488727 IGKV1-33P01594 117 aa15.42■□□□□ 0.06
CCM2-216ENST00000488727 RNASE1P07998 156 aaKnown RBP15.42■□□□□ 0.06
CCM2-216ENST00000488727 ZNF383Q8NA42 475 aa15.42■□□□□ 0.06
CCM2-216ENST00000488727 C15orf62A8K5M9 175 aa15.41■□□□□ 0.06
CCM2-216ENST00000488727 M0R036 132 aa15.41■□□□□ 0.06
CCM2-216ENST00000488727 FOLR2P14207 255 aa15.41■□□□□ 0.06
CCM2-216ENST00000488727 CD1BP29016 333 aa15.41■□□□□ 0.06
CCM2-216ENST00000488727 RELBQ01201 579 aa15.41■□□□□ 0.06
CCM2-216ENST00000488727 ETV3LQ6ZN32 361 aa15.41■□□□□ 0.06
CCM2-216ENST00000488727 ZNF429Q86V71 674 aa15.41■□□□□ 0.06
CCM2-216ENST00000488727 OR4A16Q8NH70 328 aa15.41■□□□□ 0.06
CCM2-216ENST00000488727 TET2Q6N021 2002 aaPredicted RBP15.41■□□□□ 0.06
CCM2-216ENST00000488727 H0YJW9 148 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 MBP02144 154 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 RPP30P78346 268 aaKnown RBP15.4■□□□□ 0.06
CCM2-216ENST00000488727 EBI3Q14213 229 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 OR5AN1Q8NGI8 311 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 RXFP4Q8TDU9 374 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 TMEM140Q9NV12 185 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 FAM106CPP0CH98 169 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 BCL2P10415 239 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 VDAC2P45880 294 aaPredicted RBP15.4■□□□□ 0.06
CCM2-216ENST00000488727 OR2B8PP59922 312 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 HES1Q14469 280 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 HNF4GQ14541 408 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 POU2AF1Q16633 256 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 SSX7Q7RTT5 188 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 EAF1Q96JC9 268 aaPredicted RBP15.4■□□□□ 0.06
CCM2-216ENST00000488727 CLCC1Q96S66 551 aa15.4■□□□□ 0.06
CCM2-216ENST00000488727 IFNA17P01571 189 aa15.39■□□□□ 0.05
CCM2-216ENST00000488727 FGF7P21781 194 aa15.39■□□□□ 0.05
CCM2-216ENST00000488727 Q8N6K4 173 aa15.39■□□□□ 0.05
CCM2-216ENST00000488727 MLXQ9UH92 298 aa15.39■□□□□ 0.05
CCM2-216ENST00000488727 PITPNC1Q9UKF7 332 aa15.39■□□□□ 0.05
CCM2-216ENST00000488727 MAP1LC3B2A6NCE7 125 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 FAM181BA6NEQ2 426 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 SOX15O60248 233 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 ELLP55199 621 aaPredicted RBP15.38■□□□□ 0.05
CCM2-216ENST00000488727 AKIRIN2Q53H80 203 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 ACSM6Q6P461 480 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 LCN15Q6UWW0 184 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 RITA1Q96K30 269 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 P2RX4Q99571 388 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 GGACTQ9BVM4 153 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 NPCDR1Q9BY65 106 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 MAP1LC3BQ9GZQ8 125 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 GNG13Q9P2W3 67 aa15.38■□□□□ 0.05
CCM2-216ENST00000488727 C15orf61A6NNL5 157 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 IFNA1P01562 189 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 TMEM11P17152 192 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 SPINK9Q5DT21 86 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 SSX9Q7RTT3 188 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 CYB561D1Q8N8Q1 229 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 OR2T10Q8NGZ9 312 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 RBM14Q96PK6 669 aaKnown RBP15.37■□□□□ 0.05
CCM2-216ENST00000488727 ATRQ13535 2644 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 CTXND1A0A1B0GTU2 59 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 C17orf112F2Z3M2 114 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 H3BQ15 152 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 NDUFS6O75380 124 aaKnown RBP15.37■□□□□ 0.05
CCM2-216ENST00000488727 MOSP00540 346 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 IGKV1-16P04430 117 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 MC5RP33032 325 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 RIPPLY3P57055 190 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 RNF212Q495C1 297 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 RPP25LQ8N5L8 163 aaKnown RBP15.37■□□□□ 0.05
CCM2-216ENST00000488727 HIST1H2BAQ96A08 127 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 SLC25A33Q9BSK2 321 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 C20orf24Q9BUV8 137 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 FOXA2Q9Y261 457 aaPredicted RBP15.37■□□□□ 0.05
CCM2-216ENST00000488727 WDR83OSQ9Y284 106 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 WASHC3Q9Y3C0 194 aa15.37■□□□□ 0.05
CCM2-216ENST00000488727 MT-ND4LP03901 98 aa15.36■□□□□ 0.05
CCM2-216ENST00000488727 CRYBA1P05813 215 aa15.36■□□□□ 0.05
CCM2-216ENST00000488727 AKR1C3P42330 323 aa15.36■□□□□ 0.05
CCM2-216ENST00000488727 SLC35E3Q7Z769 313 aa15.36■□□□□ 0.05
CCM2-216ENST00000488727 SLC35D1Q9NTN3 355 aa15.36■□□□□ 0.05
CCM2-216ENST00000488727 PUS1Q9Y606 427 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCM2-216ENST00000488727 FBN1P35555 2871 aaKnown RBP15.35■□□□□ 0.05
CCM2-216ENST00000488727 A0A087WWC5 75 aa15.35■□□□□ 0.05
CCM2-216ENST00000488727 PRSS46E5RG02 174 aa15.35■□□□□ 0.05
CCM2-216ENST00000488727 HRASP01112 189 aa15.35■□□□□ 0.05
CCM2-216ENST00000488727 APOA2P02652 100 aa15.35■□□□□ 0.05
CCM2-216ENST00000488727 MAS1LP35410 378 aa15.35■□□□□ 0.05
CCM2-216ENST00000488727 VKORC1L1Q8N0U8 176 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms