RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 LINC00574Q9H8X3 128 aa10.3□□□□□ -0.76
CLIC4-202ENST00000488683 UPK2O00526 184 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 RPL29P47914 159 aaKnown RBP10.29□□□□□ -0.76
CLIC4-202ENST00000488683 PDLIM4P50479 330 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 SELENOVP59797 346 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 SUMO1P63165 101 aaKnown RBP10.29□□□□□ -0.76
CLIC4-202ENST00000488683 PRCDQ00LT1 54 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 ADIPOQQ15848 244 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 TMEM200BQ69YZ2 307 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 OR10G8Q8NGN5 311 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 FAM57AQ8TBR7 257 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 HARBI1Q96MB7 349 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 TRAV34A0A0B4J273 112 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 GATCO43716 136 aaKnown RBP10.29□□□□□ -0.76
CLIC4-202ENST00000488683 SCGB1D1O95968 90 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 CD99P14209 185 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 ERVFC1-1P60608 527 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 RHOBP62745 196 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 JOSD1Q15040 202 aaPredicted RBP10.29□□□□□ -0.76
CLIC4-202ENST00000488683 TEX36Q5VZQ5 186 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 OR8I2Q8N0Y5 310 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 ADTRPQ96IZ2 230 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 TP53TG3Q9ULZ0 132 aa10.29□□□□□ -0.76
CLIC4-202ENST00000488683 GGTLC3B5MD39 225 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 THBDP07204 575 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 MGST1P10620 155 aaKnown RBP10.28□□□□□ -0.76
CLIC4-202ENST00000488683 IRF2P14316 349 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 CNTFRP26992 372 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 LCN2P80188 198 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 CENPWQ5EE01 88 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 CORO2AQ92828 525 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 SSBP3Q9BWW4 388 aaPredicted RBP10.28□□□□□ -0.76
CLIC4-202ENST00000488683 GSX1Q9H4S2 264 aaPredicted RBP10.28□□□□□ -0.76
CLIC4-202ENST00000488683 HCP5Q6MZN7 132 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 RNASEH2CQ8TDP1 164 aaKnown RBP10.28□□□□□ -0.76
CLIC4-202ENST00000488683 CTSZQ9UBR2 303 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 PRNDQ9UKY0 176 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 SLC45A2Q9UMX9 530 aa10.28□□□□□ -0.76
CLIC4-202ENST00000488683 ENSAO43768 121 aaKnown RBP10.27□□□□□ -0.76
CLIC4-202ENST00000488683 TNFSF4P23510 183 aa10.27□□□□□ -0.76
CLIC4-202ENST00000488683 FOXL1Q12952 345 aa10.27□□□□□ -0.76
CLIC4-202ENST00000488683 FAM168AQ92567 244 aa10.27□□□□□ -0.76
CLIC4-202ENST00000488683 MISP3Q96FF7 219 aa10.27□□□□□ -0.76
CLIC4-202ENST00000488683 RAB9BQ9NP90 201 aa10.27□□□□□ -0.76
CLIC4-202ENST00000488683 RNF114Q9Y508 228 aa10.27□□□□□ -0.76
CLIC4-202ENST00000488683 PTPRQQ9UMZ3 2332 aa10.27□□□□□ -0.76
CLIC4-202ENST00000488683 CACNA1BQ00975 2339 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 CRYABP02511 175 aaKnown RBP10.27□□□□□ -0.77
CLIC4-202ENST00000488683 RNASE2P10153 161 aaKnown RBP10.27□□□□□ -0.77
CLIC4-202ENST00000488683 LINC00310P59036 64 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 NUP37Q8NFH4 326 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 EAF1Q96JC9 268 aaPredicted RBP10.27□□□□□ -0.77
CLIC4-202ENST00000488683 TXNDC17Q9BRA2 123 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 ATG101Q9BSB4 218 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 FAM103A1Q9BTL3 118 aaKnown RBP10.27□□□□□ -0.77
CLIC4-202ENST00000488683 FNDC4Q9H6D8 234 aaPredicted RBP10.27□□□□□ -0.77
CLIC4-202ENST00000488683 SERTAD4Q9NUC0 356 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 RPH3ALQ9UNE2 315 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 hADV38S2A0JD32 116 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 CGB1A6NKQ9 187 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 PKIAP61925 76 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 WT1-ASQ06250 92 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 RTL8BQ17RB0 113 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 MRPL54Q6P161 138 aaKnown RBP10.27□□□□□ -0.77
CLIC4-202ENST00000488683 ZNF833PQ6ZTB9 187 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 GBGT1Q8N5D6 347 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 ST6GALNAC3Q8NDV1 305 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 OR1L6Q8NGR2 347 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 OR5R1Q8NH85 324 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 SAP30LQ9HAJ7 183 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 ZNF257Q9Y2Q1 563 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 LINC00312Q9Y6C7 94 aa10.27□□□□□ -0.77
CLIC4-202ENST00000488683 C17orf100A8MU93 164 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 TSTD3H0UI37 97 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 SLC25A17O43808 307 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 LY6HO94772 140 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 MOSP00540 346 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 CDKN1AP38936 164 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 RAB4BP61018 213 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 RAB31Q13636 194 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 DNLZQ5SXM8 178 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 OR10X1Q8NGY0 326 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 ASCL2Q99929 193 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 WNK2Q9Y3S1 2297 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 GNG5P63218 68 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 TCF15Q12870 199 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 USF2Q15853 346 aaPredicted RBP10.26□□□□□ -0.77
CLIC4-202ENST00000488683 LEMD1Q68G75 181 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 TMEM108Q6UXF1 575 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 Q71RC1 249 aaPredicted RBP10.26□□□□□ -0.77
CLIC4-202ENST00000488683 NPIPB3Q92617 1050 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 C11orf52Q96A22 123 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 MRPL18Q9H0U6 180 aaKnown RBP10.26□□□□□ -0.77
CLIC4-202ENST00000488683 CBLN4Q9NTU7 201 aa10.26□□□□□ -0.77
CLIC4-202ENST00000488683 SPTBN4Q9H254 2564 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 HELTA6NFD8 242 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 H0YJW9 148 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 FCN1O00602 326 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 TOX4O94842 621 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms