RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 NDUFA13Q9P0J0 144 aa12.05□□□□□ -0.48
CTDSP1-209ENST00000488627 KCNIP3Q9Y2W7 256 aa12.05□□□□□ -0.48
CTDSP1-209ENST00000488627 MT-CO2P00403 227 aa12.04□□□□□ -0.48
CTDSP1-209ENST00000488627 CTSGP08311 255 aa12.04□□□□□ -0.48
CTDSP1-209ENST00000488627 C8orf88P0DMB2 117 aa12.04□□□□□ -0.48
CTDSP1-209ENST00000488627 FCGR2BP31994 310 aaPredicted RBP12.04□□□□□ -0.48
CTDSP1-209ENST00000488627 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
CTDSP1-209ENST00000488627 IL22RA2Q969J5 263 aa12.04□□□□□ -0.48
CTDSP1-209ENST00000488627 ASCL2Q99929 193 aa12.04□□□□□ -0.48
CTDSP1-209ENST00000488627 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.04□□□□□ -0.48
CTDSP1-209ENST00000488627 A8MZ25 164 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 NHLRC4P0CG21 123 aaPredicted RBP12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 RNASE2P10153 161 aaKnown RBP12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 AKR1C4P17516 323 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 SPCS3P61009 180 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 BSXQ3C1V8 233 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 SPSB3Q6PJ21 355 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 SBSPONQ8IVN8 264 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 SLC35G3Q8N808 338 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 UXS1Q8NBZ7 420 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 RNASE11Q8TAA1 199 aaKnown RBP12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 MISP3Q96FF7 219 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 C19orf73Q9NVV2 129 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 TECRQ9NZ01 308 aaKnown RBP12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 CACNG5Q9UF02 275 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 MLXQ9UH92 298 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 COL7A1Q02388 2944 aa12.03□□□□□ -0.48
CTDSP1-209ENST00000488627 IGHV3-48P01763 117 aa12.02□□□□□ -0.49
CTDSP1-209ENST00000488627 FRMD6-AS1P0C7T7 363 aa12.02□□□□□ -0.49
CTDSP1-209ENST00000488627 IGHV4-30-4P0DP06 118 aa12.02□□□□□ -0.49
CTDSP1-209ENST00000488627 ELLP55199 621 aaPredicted RBP12.02□□□□□ -0.49
CTDSP1-209ENST00000488627 TMEM190Q8WZ59 177 aa12.02□□□□□ -0.49
CTDSP1-209ENST00000488627 TXN2Q99757 166 aa12.02□□□□□ -0.49
CTDSP1-209ENST00000488627 SLC25A21Q9BQT8 299 aaPredicted RBP12.02□□□□□ -0.49
CTDSP1-209ENST00000488627 A0A0B4J2A0 478 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 SNCAP37840 140 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 HOXA1P49639 335 aaPredicted RBP12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 MFAP4P55083 255 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 Q56UQ5 140 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 TMEM128Q5BJH2 165 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 LYZL2Q7Z4W2 148 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 UBAC2Q8NBM4 344 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 DYNLRB2Q8TF09 96 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 PDCD10Q9BUL8 212 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 PALMDQ9NP74 551 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 SHPKQ9UHJ6 478 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 UFC1Q9Y3C8 167 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 SELENOKQ9Y6D0 94 aa12.01□□□□□ -0.49
CTDSP1-209ENST00000488627 NDUFA4O00483 81 aa12□□□□□ -0.49
CTDSP1-209ENST00000488627 MLANAQ16655 118 aa12□□□□□ -0.49
CTDSP1-209ENST00000488627 ZNF57Q68EA5 555 aaPredicted RBP12□□□□□ -0.49
CTDSP1-209ENST00000488627 TMED4Q7Z7H5 227 aa12□□□□□ -0.49
CTDSP1-209ENST00000488627 TMEM61Q8N0U2 210 aa12□□□□□ -0.49
CTDSP1-209ENST00000488627 MARC2Q969Z3 335 aa12□□□□□ -0.49
CTDSP1-209ENST00000488627 PINX1Q96BK5 328 aaKnown RBP12□□□□□ -0.49
CTDSP1-209ENST00000488627 FNDC4Q9H6D8 234 aaPredicted RBP12□□□□□ -0.49
CTDSP1-209ENST00000488627 GAR1Q9NY12 217 aaKnown RBP12□□□□□ -0.49
CTDSP1-209ENST00000488627 MRPL27Q9P0M9 148 aaKnown RBP12□□□□□ -0.49
CTDSP1-209ENST00000488627 HUWE1Q7Z6Z7 4374 aaKnown RBP11.99□□□□□ -0.49
CTDSP1-209ENST00000488627 CCR6P51684 374 aa11.99□□□□□ -0.49
CTDSP1-209ENST00000488627 ANKRD55Q3KP44 614 aa11.99□□□□□ -0.49
CTDSP1-209ENST00000488627 BTNL8Q6UX41 500 aa11.99□□□□□ -0.49
CTDSP1-209ENST00000488627 LGI3Q8N145 548 aa11.99□□□□□ -0.49
CTDSP1-209ENST00000488627 WDR89Q96FK6 387 aaPredicted RBP11.99□□□□□ -0.49
CTDSP1-209ENST00000488627 ENY2Q9NPA8 101 aa11.99□□□□□ -0.49
CTDSP1-209ENST00000488627 MRPL36Q9P0J6 103 aaKnown RBP11.99□□□□□ -0.49
CTDSP1-209ENST00000488627 IGHV3OR16-8A0A075B7F1 116 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 K7EMT4 169 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 NUPL2O15504 423 aaKnown RBP11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 CD7P09564 240 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 SULT1A3P0DMM9 295 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 SULT1A4P0DMN0 295 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 SUB1P53999 127 aaKnown RBP eCLIP11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 SRPXP78539 464 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 GTSCR1Q86UQ5 136 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 LRTM2Q8N967 370 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 TMEM170AQ8WVE7 144 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 DAZ1Q9NQZ3 744 aaKnown RBP11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 U3KQK5 164 aa11.98□□□□□ -0.49
CTDSP1-209ENST00000488627 C15orf62A8K5M9 175 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 CORTO00230 105 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 TMEM50AO95807 157 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 ANXA3P12429 323 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 BTCP35070 178 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 HTR2BP41595 481 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 RELQ04864 619 aaPredicted RBP11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 PPP1R1AQ13522 171 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 RBMS2Q15434 407 aaKnown RBP11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 GUCA2BQ16661 112 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 DUSP18Q8NEJ0 188 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 OR10C1Q96KK4 312 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 C20orf24Q9BUV8 137 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 HSPB7Q9UBY9 170 aa11.97□□□□□ -0.49
CTDSP1-209ENST00000488627 TRAV25A0A0B4J276 109 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 A0A1B0GU03 582 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 NAP1L6A6NFF2 107 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 CEBPZOSA8MTT3 80 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 GNG7O60262 68 aa11.96□□□□□ -0.49
CTDSP1-209ENST00000488627 PITX3O75364 302 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms