RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CDK1P06493 297 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 CD2P06729 351 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 SERPINE2P07093 398 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 HSMCR30P0CW71 290 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 ELK1P19419 428 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 SRMP19623 302 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 HOXA5P20719 270 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 WNT4P56705 351 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 TAS2R43P59537 309 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 CBX3Q13185 183 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 CLINT1Q14677 625 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 RNASE12Q5GAN4 147 aaKnown RBP3.92□□□□□ -1.78
COL4A3-206ENST00000487633 RBM48Q5RL73 367 aaKnown RBP3.92□□□□□ -1.78
COL4A3-206ENST00000487633 LAIR2Q6ISS4 152 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 KCTD9Q7L273 389 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 MOB1BQ7L9L4 216 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 SCXQ7RTU7 201 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 H1FOOQ8IZA3 346 aaPredicted RBP3.92□□□□□ -1.78
COL4A3-206ENST00000487633 GLMPQ8WWB7 406 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 GRAMD2BQ96HH9 432 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 MND1Q9BWT6 205 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 PECRQ9BY49 303 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 CKLFQ9UBR5 152 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 HSF4Q9ULV5 492 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 SPATA2Q9UM82 520 aa3.92□□□□□ -1.78
COL4A3-206ENST00000487633 RBMX2Q9Y388 322 aaKnown RBP3.92□□□□□ -1.78
COL4A3-206ENST00000487633 MRPS16Q9Y3D3 137 aaKnown RBP3.92□□□□□ -1.78
COL4A3-206ENST00000487633 PUS1Q9Y606 427 aaKnown RBP eCLIP3.92□□□□□ -1.78
COL4A3-206ENST00000487633 F11RQ9Y624 299 aaKnown RBP3.92□□□□□ -1.78
COL4A3-206ENST00000487633 TRAV26-1A0A087WT03 109 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 TEX50A0A1B0GTY4 177 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 UPK2O00526 184 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 OGG1O15527 345 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 TNFSF12O43508 249 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 DENRO43583 198 aaKnown RBP3.91□□□□□ -1.78
COL4A3-206ENST00000487633 CREBL2O60519 120 aaPredicted RBP3.91□□□□□ -1.78
COL4A3-206ENST00000487633 HLA-DRB4P13762 266 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 P2RY1P47900 373 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 WFDC2Q14508 124 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 SPHARQ15513 63 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 PRSS48Q7RTY5 328 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 NANOGP1Q8N7R0 232 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 OR4A4PQ8NGN8 299 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 UFD1Q92890 307 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 SLC25A46Q96AG3 418 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 SMIM19Q96E16 107 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 GFI1Q99684 422 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 TMEM59Q9BXS4 323 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 RIMS4Q9H426 269 aaPredicted RBP3.91□□□□□ -1.78
COL4A3-206ENST00000487633 DUSP21Q9H596 190 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 FKBP14Q9NWM8 211 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 BET1LQ9NYM9 111 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 TAS2R8Q9NYW2 309 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 NSG2Q9Y328 171 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 HLA-DRB4X5D2U9 266 aa3.91□□□□□ -1.78
COL4A3-206ENST00000487633 HELTA6NFD8 242 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 MARCH11A6NNE9 402 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 FAM90A26D6RGX4 464 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 EREGO14944 169 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 MT-CO2P00403 227 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 FCGR3AP08637 254 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 NFYAP23511 347 aaPredicted RBP3.9□□□□□ -1.79
COL4A3-206ENST00000487633 MAPK3P27361 379 aaPredicted RBP3.9□□□□□ -1.79
COL4A3-206ENST00000487633 FGF9P31371 208 aaPredicted RBP3.9□□□□□ -1.79
COL4A3-206ENST00000487633 DHRS2Q13268 280 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 TPBGQ13641 420 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 MLANAQ16655 118 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 Q499Y3 187 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 FAM89BQ8N5H3 189 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 MS4A15Q8N5U1 240 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 ZNF485Q8NCK3 441 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 OR10J5Q8NHC4 309 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 TCTEX1D2Q8WW35 142 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 TMEM203Q969S6 136 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 ADTRPQ96IZ2 230 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 DERL3Q96Q80 235 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 CMSS1Q9BQ75 279 aaKnown RBP3.9□□□□□ -1.79
COL4A3-206ENST00000487633 C1QTNF4Q9BXJ3 329 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 HRASLSQ9HDD0 168 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 C12orf4Q9NQ89 552 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 THYN1Q9P016 225 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 MGAT4AQ9UM21 535 aa3.9□□□□□ -1.79
COL4A3-206ENST00000487633 RBM7Q9Y580 266 aaKnown RBP3.9□□□□□ -1.79
COL4A3-206ENST00000487633 A0A096LPF7 62 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 CRXO43186 299 aaPredicted RBP3.89□□□□□ -1.79
COL4A3-206ENST00000487633 HBE1P02100 147 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 CD1AP06126 327 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 PTHLHP12272 177 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 PSMB9P28065 219 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 NKX2-1P43699 371 aaPredicted RBP3.89□□□□□ -1.79
COL4A3-206ENST00000487633 ALDH3B2P48448 385 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 GABARAPL2P60520 117 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 RELQ04864 619 aaPredicted RBP3.89□□□□□ -1.79
COL4A3-206ENST00000487633 OR5I1Q13606 314 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 P2RY14Q15391 338 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 TRAM1Q15629 374 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 RRN3P1Q2M238 152 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 ACSM3Q53FZ2 586 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 CADM3Q8N126 398 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms