RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 BSCL2Q96G97 398 aaPredicted RBP11.26□□□□□ -0.61
LIMS3-205ENST00000487150 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
LIMS3-205ENST00000487150 OR4C12Q96R67 309 aa11.26□□□□□ -0.61
LIMS3-205ENST00000487150 TXN2Q99757 166 aa11.26□□□□□ -0.61
LIMS3-205ENST00000487150 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
LIMS3-205ENST00000487150 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
LIMS3-205ENST00000487150 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
LIMS3-205ENST00000487150 HSPB7Q9UBY9 170 aa11.26□□□□□ -0.61
LIMS3-205ENST00000487150 FLVCR2Q9UPI3 526 aa11.26□□□□□ -0.61
LIMS3-205ENST00000487150 MFSD2BA6NFX1 497 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 BMPR1BO00238 502 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 ANXA7P20073 488 aaKnown RBP11.25□□□□□ -0.61
LIMS3-205ENST00000487150 KLF5Q13887 457 aaPredicted RBP11.25□□□□□ -0.61
LIMS3-205ENST00000487150 FAM106AQ4KMX7 169 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 ACSM6Q6P461 480 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 CLEC19AQ6UXS0 136 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 Q6ZRM9 215 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 SLC24A4Q8NFF2 622 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 OR9G4Q8NGQ1 327 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
LIMS3-205ENST00000487150 TBC1D24Q9ULP9 559 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 VWFP04275 2813 aa11.25□□□□□ -0.61
LIMS3-205ENST00000487150 SAP30O75446 220 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 H2AFB2P0C5Z0 115 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 FCGR2BP31994 310 aaPredicted RBP11.24□□□□□ -0.61
LIMS3-205ENST00000487150 GPR183P32249 361 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 SYNJ2BPP57105 145 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 EGFEM1PQ0D2K5 195 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 SPINK9Q5DT21 86 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 PLET1Q6UQ28 207 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 RNASEH2CQ8TDP1 164 aaKnown RBP11.24□□□□□ -0.61
LIMS3-205ENST00000487150 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 MITD1Q8WV92 249 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 SIGLEC8Q9NYZ4 499 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 U3KQ87 197 aa11.24□□□□□ -0.61
LIMS3-205ENST00000487150 K7EIM0 57 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 LGALS9O00182 355 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 NUPL2O15504 423 aaKnown RBP11.23□□□□□ -0.61
LIMS3-205ENST00000487150 TRBV12-3P01733 135 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 CLEC3BP05452 202 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 NPBWR1P48145 328 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 MFAP4P55083 255 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 RPP30P78346 268 aaKnown RBP11.23□□□□□ -0.61
LIMS3-205ENST00000487150 DEFA6Q01524 100 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
LIMS3-205ENST00000487150 BSXQ3C1V8 233 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 C2orf83Q53S99 150 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 Q56UQ5 140 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 GPHB5Q86YW7 130 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 SCARB1Q8WTV0 552 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 GPN1Q9HCN4 374 aaPredicted RBP11.23□□□□□ -0.61
LIMS3-205ENST00000487150 PALMDQ9NP74 551 aa11.23□□□□□ -0.61
LIMS3-205ENST00000487150 TRAV6A0A075B6T7 132 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 I3L2K1 104 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 TGOLN2O43493 480 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 PITX3O75364 302 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 MT-CO2P00403 227 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 HOXB5P09067 269 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 RNASE2P10153 161 aaKnown RBP11.22□□□□□ -0.61
LIMS3-205ENST00000487150 NPY1RP25929 384 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 OPRK1P41145 380 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 MFAP2P55001 183 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 GGNBP1Q5YKI7 109 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 ETFRF1Q6IPR1 90 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 UBAC2Q8NBM4 344 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 DUSP18Q8NEJ0 188 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 ZNF431Q8TF32 576 aaPredicted RBP11.22□□□□□ -0.61
LIMS3-205ENST00000487150 PINX1Q96BK5 328 aaKnown RBP11.22□□□□□ -0.61
LIMS3-205ENST00000487150 PKD1L1Q8TDX9 2849 aa11.22□□□□□ -0.61
LIMS3-205ENST00000487150 NOTCH3Q9UM47 2321 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 PPP5D1E7EU14 171 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 WRBO00258 174 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 GNG7O60262 68 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 PRAF2O60831 178 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 IFNA10P01566 189 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 SLC25A4P12235 298 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 MARC2Q969Z3 335 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 UFC1Q9Y3C8 167 aa11.21□□□□□ -0.61
LIMS3-205ENST00000487150 NBEAL1Q6ZS30 2694 aa11.21□□□□□ -0.62
LIMS3-205ENST00000487150 OR2T8A6NH00 312 aa11.2□□□□□ -0.62
LIMS3-205ENST00000487150 A8MWP6 167 aa11.2□□□□□ -0.62
LIMS3-205ENST00000487150 IL5P05113 134 aa11.2□□□□□ -0.62
LIMS3-205ENST00000487150 ELLP55199 621 aaPredicted RBP11.2□□□□□ -0.62
LIMS3-205ENST00000487150 RAB11AP62491 216 aa11.2□□□□□ -0.62
LIMS3-205ENST00000487150 OR2K2Q8NGT1 345 aa11.2□□□□□ -0.62
LIMS3-205ENST00000487150 RBKSQ9H477 322 aa11.2□□□□□ -0.62
LIMS3-205ENST00000487150 S4R3C0 116 aa11.2□□□□□ -0.62
LIMS3-205ENST00000487150 NDUFA4O00483 81 aa11.19□□□□□ -0.62
LIMS3-205ENST00000487150 SYNGR2O43760 224 aa11.19□□□□□ -0.62
LIMS3-205ENST00000487150 NXPH3O95157 252 aa11.19□□□□□ -0.62
LIMS3-205ENST00000487150 OR2C1O95371 312 aa11.19□□□□□ -0.62
LIMS3-205ENST00000487150 NKX2-1P43699 371 aaPredicted RBP11.19□□□□□ -0.62
LIMS3-205ENST00000487150 LCN12Q6JVE5 192 aa11.19□□□□□ -0.62
LIMS3-205ENST00000487150 DYNLRB2Q8TF09 96 aa11.19□□□□□ -0.62
LIMS3-205ENST00000487150 DAZ1Q9NQZ3 744 aaKnown RBP11.19□□□□□ -0.62
LIMS3-205ENST00000487150 TRAV30A0A087WSZ9 112 aa11.18□□□□□ -0.62
LIMS3-205ENST00000487150 ZNF320A2RRD8 509 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms