RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 BPIFB3P59826 476 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 FXYD3Q14802 87 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 TMEM144Q7Z5S9 345 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 OR1P1Q8NH06 330 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 P2RX4Q99571 388 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 RASL11BQ9BPW5 248 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 PBDC1Q9BVG4 233 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 MEGF9Q9H1U4 602 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 SLC39A9Q9NUM3 307 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 RFNGQ9Y644 331 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 SPTAN1Q13813 2472 aaKnown RBP5.62□□□□□ -1.51
SF3A3-206ENST00000487062 A0A096LNT2 108 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 TRAV1-1A0A0B4J248 108 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 CTXND1A0A1B0GTU2 59 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 A0A1B0GW64 132 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 TEX22C9J3V5 150 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 ZNF561-AS1K7EIQ3 104 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 FCN1O00602 326 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 ANKRD17O75179 2603 aaKnown RBP5.61□□□□□ -1.51
SF3A3-206ENST00000487062 TGFAP01135 160 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 HLA-DRB1P01911 266 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 REG1AP05451 166 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 ZP3P21754 424 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 PAX6P26367 422 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 RPL29P47914 159 aaKnown RBP5.61□□□□□ -1.51
SF3A3-206ENST00000487062 FHITP49789 147 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 GAMTQ14353 236 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 PEA15Q15121 130 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 TOR2AQ5JU69 321 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 RUSC1-AS1Q66K80 236 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 ZNF562Q6V9R5 426 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 SLC16A13Q7RTY0 426 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 OR10G4Q8NGN3 311 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 OR10G9Q8NGN4 311 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 OR10G7Q8NGN6 311 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 SFT2D1Q8WV19 159 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 SSMEM1Q8WWF3 244 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 MBD3L1Q8WWY6 194 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 ARPC1AQ92747 370 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 AJUBAQ96IF1 538 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 Q96MF0 132 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 SMG1Q96Q15 3661 aaKnown RBP5.61□□□□□ -1.51
SF3A3-206ENST00000487062 GGTLC1Q9BX51 225 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 ABCA2Q9BZC7 2435 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 ACTR3CQ9C0K3 210 aaPredicted RBP5.61□□□□□ -1.51
SF3A3-206ENST00000487062 TREM1Q9NP99 234 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 RPRMQ9NS64 109 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 LSM4Q9Y4Z0 139 aaKnown RBP5.61□□□□□ -1.51
SF3A3-206ENST00000487062 F11RQ9Y624 299 aaKnown RBP5.61□□□□□ -1.51
SF3A3-206ENST00000487062 PXMP4Q9Y6I8 212 aa5.61□□□□□ -1.51
SF3A3-206ENST00000487062 CR1P17927 2039 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 COL12A1Q99715 3063 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 IGHV3OR16-10A0A075B7F0 116 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 A0A0U1RQK1 487 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 A0A1W2PPV4 95 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 MAP1LC3B2A6NCE7 125 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 AGPAT2O15120 278 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 IFNA1P01562 189 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 IGHV4-38-2P0DP08 117 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 DEFA4P12838 97 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 AREGP15514 252 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 CDC34P49427 236 aaPredicted RBP5.6□□□□□ -1.51
SF3A3-206ENST00000487062 SSBP2P81877 361 aaPredicted RBP5.6□□□□□ -1.51
SF3A3-206ENST00000487062 GUK1Q16774 197 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 TMEM249Q2WGJ8 235 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 FAM120AOSQ5T036 256 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 PVRIGQ6DKI7 326 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 ACSM6Q6P461 480 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 FAM122CQ6P4D5 195 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 BRD3OSQ6XYD6 125 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 Q8N9W7 124 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 MISP3Q96FF7 219 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 NARS2Q96I59 477 aaKnown RBP5.6□□□□□ -1.51
SF3A3-206ENST00000487062 MGST2Q99735 147 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 SSX3Q99909 188 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 SLC25A33Q9BSK2 321 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 MAP1LC3BQ9GZQ8 125 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 EIF5A2Q9GZV4 153 aaKnown RBP5.6□□□□□ -1.51
SF3A3-206ENST00000487062 SMDT1Q9H4I9 107 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 VSIRQ9H7M9 311 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 ZMAT4Q9H898 229 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 PITPNC1Q9UKF7 332 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 MOB4Q9Y3A3 225 aa5.6□□□□□ -1.51
SF3A3-206ENST00000487062 LRRK2Q5S007 2527 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 CHD6Q8TD26 2715 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 A0A1B0GV50 99 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 NPIPB5A8MRT5 1133 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 MT-CO2P00403 227 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 APELAP0DMC3 54 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 IGHV4-31P0DP07 118 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 CTRB1P17538 263 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 OR10J1P30954 320 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 B2MP61769 119 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 SELENOTP62341 195 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 RHOBP62745 196 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 CX3CL1P78423 397 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 MIC13Q5XKP0 118 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 CYB5R2Q6BCY4 276 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 CTRB2Q6GPI1 263 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 SPSB3Q6PJ21 355 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms