RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 GNAO1P09471 354 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 ZNF735P0CB33 412 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 DNAH10OSP0CZ25 163 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 SAA1P0DJI8 122 aaPredicted RBP2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 C8orf88P0DMB2 117 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 HIST1H1BP16401 226 aaKnown RBP2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 GALP22466 123 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 GADD45AP24522 165 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 PSMB6P28072 239 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 BMI1P35226 326 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 MAS1LP35410 378 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 ARL3P36405 182 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 APOC4P55056 127 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 TRAM1Q15629 374 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 RAB11BQ15907 218 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 TMEM91Q6ZNR0 172 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 IDO2Q6ZQW0 420 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 H1FOOQ8IZA3 346 aaPredicted RBP2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 KIR2DL5AQ8N109 375 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 LINC00612Q8N6U2 182 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 UXS1Q8NBZ7 420 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 OR10R2Q8NGX6 335 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 KIR2DL5BQ8NHK3 375 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 VSTM2AQ8TAG5 236 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 TMEM167AQ8TBQ9 72 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 MARC2Q969Z3 335 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 EEF1AKMT3Q96AZ1 226 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 RAB3CQ96E17 227 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 OR2A7Q96R45 310 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 GINS4Q9BRT9 223 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 OR51E2Q9H255 320 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 SCPEP1Q9HB40 452 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 SLC2A9Q9NRM0 540 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 MRPL27Q9P0M9 148 aaKnown RBP2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 MLXQ9UH92 298 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 LSM2Q9Y333 95 aaKnown RBP2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 KLK5Q9Y337 293 aaPredicted RBP2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 PRELID3BQ9Y3B1 194 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 AK6Q9Y3D8 172 aaKnown RBP2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 V9GY05 133 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 FRAS1Q86XX4 4008 aa2.9□□□□□ -1.95
SNRNP40-205ENST00000486941 IGLV11-55A0A075B6I3 123 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 TRBV7-1A0A0A6YYK4 115 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 METTL21EPA6NDL7 271 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 E7EUB6 86 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 PTGES3LE9PB15 166 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 MFNGO00587 321 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 TSPAN4O14817 238 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 FCGR3BO75015 233 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 KBTBD11O94819 623 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 HRASP01112 189 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 HLA-DQB1P01920 261 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CLEC3BP05452 202 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CTXN2P0C2S0 81 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CD36P16671 472 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 ZNF182P17025 639 aaPredicted RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CTRB1P17538 263 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 PSMA1P25786 263 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CALRP27797 417 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 TALDO1P37837 337 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 RPL27AP46776 148 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CLDN12P56749 244 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 EWSR1Q01844 656 aaKnown RBP eCLIP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 KMT2AQ03164 3969 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 PLA2G7Q13093 441 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 ARFRP1Q13795 201 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 IRF3Q14653 427 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 ARL6IP1Q15041 203 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 MED22Q15528 200 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 C10orf55Q5SWW7 151 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 LIPKQ5VXJ0 399 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 LGALS9CQ6DKI2 356 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CTRB2Q6GPI1 263 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CLEC19AQ6UXS0 136 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 RBPMS2Q6ZRY4 209 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 LYG2Q86SG7 212 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 SLC38A6Q8IZM9 456 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 PUSL1Q8N0Z8 303 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 RPP25LQ8N5L8 163 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 ZNF645Q8N7E2 425 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 OR1L6Q8NGR2 347 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CACNG8Q8WXS5 425 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 UFD1Q92890 307 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 TMEM203Q969S6 136 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 CXorf58Q96LI9 332 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 HSD17B10Q99714 261 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 SPAG8Q99932 426 aaPredicted RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 DCUN1D5Q9BTE7 237 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 C5orf66Q9H5L9 145 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 ACOT13Q9NPJ3 140 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 SCN3BQ9NY72 215 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 MRPS7Q9Y2R9 242 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 RBMX2Q9Y388 322 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 UFC1Q9Y3C8 167 aa2.89□□□□□ -1.95
SNRNP40-205ENST00000486941 A0A075B6Q4 140 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 IGKV1D-8A0A087WSZ0 117 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 TRAV1-2A0A0B4J238 106 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 A0A1B0GW64 132 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 IFITM5A6NNB3 132 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 PDCD5O14737 125 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms