RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 TOMM5Q8N4H5 51 aa12.05□□□□□ -0.48
HDAC8-218ENST00000486704 CACNG8Q8WXS5 425 aa12.05□□□□□ -0.48
HDAC8-218ENST00000486704 MISP3Q96FF7 219 aa12.05□□□□□ -0.48
HDAC8-218ENST00000486704 TXN2Q99757 166 aa12.05□□□□□ -0.48
HDAC8-218ENST00000486704 C19orf73Q9NVV2 129 aa12.05□□□□□ -0.48
HDAC8-218ENST00000486704 UFC1Q9Y3C8 167 aa12.05□□□□□ -0.48
HDAC8-218ENST00000486704 STAB2Q8WWQ8 2551 aa12.05□□□□□ -0.48
HDAC8-218ENST00000486704 NDUFA4O00483 81 aa12.04□□□□□ -0.48
HDAC8-218ENST00000486704 ADMP35318 185 aa12.04□□□□□ -0.48
HDAC8-218ENST00000486704 SPANXN2Q5MJ10 180 aa12.04□□□□□ -0.48
HDAC8-218ENST00000486704 TMEM268Q5VZI3 342 aa12.04□□□□□ -0.48
HDAC8-218ENST00000486704 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
HDAC8-218ENST00000486704 CHRDL1Q9BU40 450 aa12.04□□□□□ -0.48
HDAC8-218ENST00000486704 MLXQ9UH92 298 aa12.04□□□□□ -0.48
HDAC8-218ENST00000486704 U3KQK5 164 aa12.04□□□□□ -0.48
HDAC8-218ENST00000486704 IGHV3-21A0A0B4J1V1 117 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 CORTO00230 105 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 MT-CO2P00403 227 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 SNCAP37840 140 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 MFAP4P55083 255 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 SPCS3P61009 180 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 TMEM187Q14656 261 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 TM4SF20Q53R12 229 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 Q56UQ5 140 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 SPINK9Q5DT21 86 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 Q6ZRM9 215 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 SBSPONQ8IVN8 264 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 UXS1Q8NBZ7 420 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 ASCL2Q99929 193 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 SRRQ9GZT4 340 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 DAZ1Q9NQZ3 744 aaKnown RBP12.03□□□□□ -0.48
HDAC8-218ENST00000486704 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.03□□□□□ -0.48
HDAC8-218ENST00000486704 MRPL27Q9P0M9 148 aaKnown RBP12.03□□□□□ -0.48
HDAC8-218ENST00000486704 KCNIP3Q9Y2W7 256 aa12.03□□□□□ -0.48
HDAC8-218ENST00000486704 IGHV3-35A0A0C4DH35 117 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 CTSGP08311 255 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 RNASE2P10153 161 aaKnown RBP12.02□□□□□ -0.49
HDAC8-218ENST00000486704 HOXA1P49639 335 aaPredicted RBP12.02□□□□□ -0.49
HDAC8-218ENST00000486704 SUPT4H1P63272 117 aaKnown RBP12.02□□□□□ -0.49
HDAC8-218ENST00000486704 SRPXP78539 464 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 BSXQ3C1V8 233 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 ZNF57Q68EA5 555 aaPredicted RBP12.02□□□□□ -0.49
HDAC8-218ENST00000486704 TMEM61Q8N0U2 210 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 UBAC2Q8NBM4 344 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 WWC2-AS2Q96NR7 200 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 NDUFA13Q9P0J0 144 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 CACNG5Q9UF02 275 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 CACFD1Q9UGQ2 172 aa12.02□□□□□ -0.49
HDAC8-218ENST00000486704 TRAV25A0A0B4J276 109 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 A0A0B4J2A0 478 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 K7EMT4 169 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 NUPL2O15504 423 aaKnown RBP12.01□□□□□ -0.49
HDAC8-218ENST00000486704 ANXA3P12429 323 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 SUB1P53999 127 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDAC8-218ENST00000486704 CD81P60033 236 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 RELQ04864 619 aaPredicted RBP12.01□□□□□ -0.49
HDAC8-218ENST00000486704 BTNL8Q6UX41 500 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 GPR146Q96CH1 333 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 WDR89Q96FK6 387 aaPredicted RBP12.01□□□□□ -0.49
HDAC8-218ENST00000486704 ZNF414Q96IQ9 312 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 SLC25A21Q9BQT8 299 aaPredicted RBP12.01□□□□□ -0.49
HDAC8-218ENST00000486704 ENY2Q9NPA8 101 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 SHPKQ9UHJ6 478 aa12.01□□□□□ -0.49
HDAC8-218ENST00000486704 TENM3Q9P273 2699 aa12□□□□□ -0.49
HDAC8-218ENST00000486704 C15orf62A8K5M9 175 aa12□□□□□ -0.49
HDAC8-218ENST00000486704 AKR1C4P17516 323 aa12□□□□□ -0.49
HDAC8-218ENST00000486704 TMEM128Q5BJH2 165 aa12□□□□□ -0.49
HDAC8-218ENST00000486704 NMSQ5H8A3 153 aa12□□□□□ -0.49
HDAC8-218ENST00000486704 PINX1Q96BK5 328 aaKnown RBP12□□□□□ -0.49
HDAC8-218ENST00000486704 NEURL2Q9BR09 285 aa12□□□□□ -0.49
HDAC8-218ENST00000486704 TM2D3Q9BRN9 247 aa12□□□□□ -0.49
HDAC8-218ENST00000486704 DUXBA0A1W2PPF3 345 aa11.99□□□□□ -0.49
HDAC8-218ENST00000486704 GNG7O60262 68 aa11.99□□□□□ -0.49
HDAC8-218ENST00000486704 SULT1A3P0DMM9 295 aa11.99□□□□□ -0.49
HDAC8-218ENST00000486704 SULT1A4P0DMN0 295 aa11.99□□□□□ -0.49
HDAC8-218ENST00000486704 HTR2BP41595 481 aa11.99□□□□□ -0.49
HDAC8-218ENST00000486704 GUCA2BQ16661 112 aa11.99□□□□□ -0.49
HDAC8-218ENST00000486704 LGI3Q8N145 548 aa11.99□□□□□ -0.49
HDAC8-218ENST00000486704 OR10C1Q96KK4 312 aa11.99□□□□□ -0.49
HDAC8-218ENST00000486704 PRR13Q9NZ81 148 aa11.99□□□□□ -0.49
HDAC8-218ENST00000486704 HUWE1Q7Z6Z7 4374 aaKnown RBP11.99□□□□□ -0.49
HDAC8-218ENST00000486704 CD7P09564 240 aa11.98□□□□□ -0.49
HDAC8-218ENST00000486704 NPBWR1P48145 328 aa11.98□□□□□ -0.49
HDAC8-218ENST00000486704 SLC16A13Q7RTY0 426 aa11.98□□□□□ -0.49
HDAC8-218ENST00000486704 DUSP18Q8NEJ0 188 aa11.98□□□□□ -0.49
HDAC8-218ENST00000486704 RCHY1Q96PM5 261 aa11.98□□□□□ -0.49
HDAC8-218ENST00000486704 ZMAT4Q9H898 229 aa11.98□□□□□ -0.49
HDAC8-218ENST00000486704 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
HDAC8-218ENST00000486704 CCR6P51684 374 aa11.97□□□□□ -0.49
HDAC8-218ENST00000486704 SMCO1Q147U7 214 aa11.97□□□□□ -0.49
HDAC8-218ENST00000486704 RBMS2Q15434 407 aaKnown RBP11.97□□□□□ -0.49
HDAC8-218ENST00000486704 ANKRD55Q3KP44 614 aa11.97□□□□□ -0.49
HDAC8-218ENST00000486704 C2orf83Q53S99 150 aa11.97□□□□□ -0.49
HDAC8-218ENST00000486704 LINC00322Q6ZN03 302 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-218ENST00000486704 TMED4Q7Z7H5 227 aa11.97□□□□□ -0.49
HDAC8-218ENST00000486704 LRTM2Q8N967 370 aa11.97□□□□□ -0.49
HDAC8-218ENST00000486704 SPAG8Q99932 426 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-218ENST00000486704 C20orf24Q9BUV8 137 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms