RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ASB13Q8WXK3 278 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 CIB3Q96Q77 187 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-229ENST00000486665 ZFP57Q9NU63 452 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 KLK9Q9UKQ9 250 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 U3KQ87 197 aa9.95□□□□□ -0.82
HDAC6-229ENST00000486665 IGLV11-55A0A075B6I3 123 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 TRBV9A0A0B4J1U6 114 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 FAM24AA6NFZ4 105 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 OR2J3O76001 311 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 BRI3O95415 125 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 RLN2P04090 185 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 PF4V1P10720 104 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 CD28P10747 220 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 LYL1P12980 280 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 NPY1RP25929 384 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 PSMB8P28062 276 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 RAB9AP51151 201 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 TAS2R30P59541 319 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 FOXE3Q13461 319 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 MLANAQ16655 118 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 C2orf83Q53S99 150 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 TEX38Q6PEX7 206 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 C11orf44Q8N8P7 122 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 MBD2Q9UBB5 411 aa9.94□□□□□ -0.82
HDAC6-229ENST00000486665 IGHV3-21A0A0B4J1V1 117 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 A0A1B0GUS0 222 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 PMS2P5A8MQ11 134 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 E5RGE8 158 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 H3BUA1 57 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 TSC22D2O75157 780 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 LY86O95711 162 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 TRGV3P03979 118 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 RPLP1P05386 114 aaKnown RBP9.93□□□□□ -0.82
HDAC6-229ENST00000486665 ELANEP08246 267 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 PVALBP20472 110 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-229ENST00000486665 SUB1P53999 127 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC6-229ENST00000486665 RPL23AP62750 156 aaKnown RBP9.93□□□□□ -0.82
HDAC6-229ENST00000486665 RHOGP84095 191 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 TMEM14EPQ6UXP3 125 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 RNF152Q8N8N0 203 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 MISP3Q96FF7 219 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 NEURL2Q9BR09 285 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 FBXL7Q9UJT9 491 aa9.93□□□□□ -0.82
HDAC6-229ENST00000486665 PAIP2BQ9ULR5 123 aaKnown RBP9.93□□□□□ -0.82
HDAC6-229ENST00000486665 STRAPQ9Y3F4 350 aaKnown RBP9.93□□□□□ -0.82
HDAC6-229ENST00000486665 IGSF23A1L1A6 192 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 I3L2K1 104 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 METTL15P1P0C7V9 234 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 SLC25A4P12235 298 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 HIST1H1BP16401 226 aaKnown RBP9.92□□□□□ -0.82
HDAC6-229ENST00000486665 ATP5IP56385 69 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-229ENST00000486665 TPPP2P59282 170 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 RPP30P78346 268 aaKnown RBP9.92□□□□□ -0.82
HDAC6-229ENST00000486665 FGL1Q08830 312 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 ARL16Q0P5N6 197 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 TMEM65Q6PI78 240 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 ETV3LQ6ZN32 361 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 AKAP14Q86UN6 197 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 HAPLN4Q86UW8 402 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 COMMD1Q8N668 190 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 OR1L6Q8NGR2 347 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 THAP6Q8TBB0 222 aa9.92□□□□□ -0.82
HDAC6-229ENST00000486665 BSCL2Q96G97 398 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-229ENST00000486665 LYRM2Q9NU23 88 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-229ENST00000486665 K7EIM0 57 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 MT-CO2P00403 227 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 IGHV3-48P01763 117 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 IFNA4P05014 189 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 OR8U8P0C7N1 319 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 P2RY1P47900 373 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 CAV2P51636 162 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 RAB11AP62491 216 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 C18orf65Q6ZTR6 163 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 TCTE3Q8IZS6 198 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 TMEM252Q8N6L7 170 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 ZNF491Q8N8L2 437 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 NECAP1Q8NC96 275 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 OR11H4Q8NGC9 324 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 MYOZ3Q8TDC0 251 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 WFDC12Q8WWY7 111 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 DCUN1D4Q92564 292 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 PINX1Q96BK5 328 aaKnown RBP9.91□□□□□ -0.82
HDAC6-229ENST00000486665 FNDC4Q9H6D8 234 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-229ENST00000486665 SLA2Q9H6Q3 261 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 MRPL36Q9P0J6 103 aaKnown RBP9.91□□□□□ -0.82
HDAC6-229ENST00000486665 S4R3C0 116 aa9.91□□□□□ -0.82
HDAC6-229ENST00000486665 TCRBV4S1A1TA0A5B7 111 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 MFSD2BA6NFX1 497 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 PRSS46E5RG02 174 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 CYB5BO43169 146 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 CST7O76096 145 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 IGHV3-11P01762 117 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 IGHV3-23P01764 117 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 PET100P0DJ07 73 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 NHLH2Q02577 135 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 ATP5G2Q06055 141 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 C15orf32Q32M92 178 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 NOXA1Q86UR1 476 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 OR4X2Q8NGF9 303 aa9.9□□□□□ -0.82
HDAC6-229ENST00000486665 RNASEH2CQ8TDP1 164 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms