RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 METTL1Q9UBP6 276 aaKnown RBP16.35■□□□□ 0.21
HPS3-206ENST00000486530 IGLC7A0M8Q6 106 aa16.34■□□□□ 0.21
HPS3-206ENST00000486530 CEACAM3P40198 252 aa16.34■□□□□ 0.21
HPS3-206ENST00000486530 COMPP49747 757 aaPredicted RBP16.34■□□□□ 0.21
HPS3-206ENST00000486530 RAB5BP61020 215 aa16.34■□□□□ 0.21
HPS3-206ENST00000486530 MLANAQ16655 118 aa16.34■□□□□ 0.21
HPS3-206ENST00000486530 ZNF114Q8NC26 417 aa16.34■□□□□ 0.21
HPS3-206ENST00000486530 MALSU1Q96EH3 234 aa16.34■□□□□ 0.21
HPS3-206ENST00000486530 C19orf24Q9BVV8 132 aa16.34■□□□□ 0.21
HPS3-206ENST00000486530 PRELID1Q9Y255 219 aa16.34■□□□□ 0.21
HPS3-206ENST00000486530 NAV3Q8IVL0 2385 aa16.34■□□□□ 0.21
HPS3-206ENST00000486530 ODF3BA8MYP8 253 aa16.33■□□□□ 0.21
HPS3-206ENST00000486530 C1orf196B1AJZ1 125 aa16.33■□□□□ 0.21
HPS3-206ENST00000486530 F6UZH7 168 aa16.33■□□□□ 0.21
HPS3-206ENST00000486530 RNF224P0DH78 156 aa16.33■□□□□ 0.21
HPS3-206ENST00000486530 UBE2G2P60604 165 aa16.33■□□□□ 0.21
HPS3-206ENST00000486530 CST9LP1Q5W188 147 aa16.33■□□□□ 0.21
HPS3-206ENST00000486530 C1orf122Q6ZSJ8 110 aa16.33■□□□□ 0.21
HPS3-206ENST00000486530 PPP1R27Q86WC6 154 aa16.33■□□□□ 0.21
HPS3-206ENST00000486530 CTRB1P17538 263 aa16.33■□□□□ 0.2
HPS3-206ENST00000486530 GCHFRP30047 84 aa16.33■□□□□ 0.2
HPS3-206ENST00000486530 SPATA31B1PQ5VZV4 182 aa16.33■□□□□ 0.2
HPS3-206ENST00000486530 CTRB2Q6GPI1 263 aa16.33■□□□□ 0.2
HPS3-206ENST00000486530 ACY3Q96HD9 319 aa16.33■□□□□ 0.2
HPS3-206ENST00000486530 FUT9Q9Y231 359 aa16.33■□□□□ 0.2
HPS3-206ENST00000486530 ARHGAP32A7KAX9 2087 aa16.32■□□□□ 0.2
HPS3-206ENST00000486530 NDUFS7O75251 213 aa16.32■□□□□ 0.2
HPS3-206ENST00000486530 ATP5G3P48201 142 aa16.32■□□□□ 0.2
HPS3-206ENST00000486530 LDLRAD2Q5SZI1 272 aa16.32■□□□□ 0.2
HPS3-206ENST00000486530 FAM78BQ5VT40 261 aa16.32■□□□□ 0.2
HPS3-206ENST00000486530 PVRIGQ6DKI7 326 aa16.32■□□□□ 0.2
HPS3-206ENST00000486530 OR2T6Q8NHC8 308 aa16.32■□□□□ 0.2
HPS3-206ENST00000486530 CTDSP1Q9GZU7 261 aa16.32■□□□□ 0.2
HPS3-206ENST00000486530 FNDC4Q9H6D8 234 aaPredicted RBP16.32■□□□□ 0.2
HPS3-206ENST00000486530 TIMM23O14925 209 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 CLN5O75503 358 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 VENTXO95231 258 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 HABP2Q14520 560 aaPredicted RBP16.31■□□□□ 0.2
HPS3-206ENST00000486530 ADIRFQ15847 76 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 ETFRF1Q6IPR1 90 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 HCP5Q6MZN7 132 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 PLXNB1O43157 2135 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 REG1AP05451 166 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 OR5G3P0C626 314 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 KLRD1Q13241 179 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 ELOBQ15370 118 aa16.31■□□□□ 0.2
HPS3-206ENST00000486530 CLDN34H7C241 214 aa16.3■□□□□ 0.2
HPS3-206ENST00000486530 IGHV2-5P01817 119 aa16.3■□□□□ 0.2
HPS3-206ENST00000486530 RPL23P62829 140 aaKnown RBP16.3■□□□□ 0.2
HPS3-206ENST00000486530 SMUG1Q53HV7 270 aa16.3■□□□□ 0.2
HPS3-206ENST00000486530 MIR17HGQ75NE6 70 aa16.3■□□□□ 0.2
HPS3-206ENST00000486530 ZFP82Q8N141 532 aa16.3■□□□□ 0.2
HPS3-206ENST00000486530 THAP8Q8NA92 274 aa16.3■□□□□ 0.2
HPS3-206ENST00000486530 FBXL15Q9H469 300 aa16.3■□□□□ 0.2
HPS3-206ENST00000486530 TECRQ9NZ01 308 aaKnown RBP16.3■□□□□ 0.2
HPS3-206ENST00000486530 ARL2-SNX15V9GYD0 113 aa16.3■□□□□ 0.2
HPS3-206ENST00000486530 NPPCP23582 126 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 GATA2P23769 480 aaPredicted RBP16.29■□□□□ 0.2
HPS3-206ENST00000486530 GNB1P62873 340 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 Q8WTZ3 238 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 CFHR4Q92496 578 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 RNF2Q99496 336 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 BIN3Q9NQY0 253 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 CORTO00230 105 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 AREGP15514 252 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 RND2P52198 227 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 TAS2R45P59539 299 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 PLGLAQ15195 96 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 ZNF343Q6P1L6 599 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 VMO1Q7Z5L0 202 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 OR1P1Q8NH06 330 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 MRPL32Q9BYC8 188 aaKnown RBP16.29■□□□□ 0.2
HPS3-206ENST00000486530 HILPDAQ9Y5L2 63 aa16.29■□□□□ 0.2
HPS3-206ENST00000486530 TCRBV4S1A1TA0A5B7 111 aa16.28■□□□□ 0.2
HPS3-206ENST00000486530 TEX22C9J3V5 150 aa16.28■□□□□ 0.2
HPS3-206ENST00000486530 GOSR1O95249 250 aa16.28■□□□□ 0.2
HPS3-206ENST00000486530 PQLC2Q6ZP29 291 aa16.28■□□□□ 0.2
HPS3-206ENST00000486530 OR51G1Q8NGK1 321 aa16.28■□□□□ 0.2
HPS3-206ENST00000486530 C2CD4CQ8TF44 421 aa16.28■□□□□ 0.2
HPS3-206ENST00000486530 NPIPB3Q92617 1050 aa16.28■□□□□ 0.2
HPS3-206ENST00000486530 TMEM167BQ9NRX6 74 aa16.28■□□□□ 0.2
HPS3-206ENST00000486530 FOXH1O75593 365 aa16.27■□□□□ 0.2
HPS3-206ENST00000486530 CRYGCP07315 174 aa16.27■□□□□ 0.2
HPS3-206ENST00000486530 ZFP36P26651 326 aaKnown RBP16.27■□□□□ 0.2
HPS3-206ENST00000486530 SELENOTP62341 195 aa16.27■□□□□ 0.2
HPS3-206ENST00000486530 PAX2Q02962 417 aa16.27■□□□□ 0.2
HPS3-206ENST00000486530 MMDQ15546 238 aa16.27■□□□□ 0.2
HPS3-206ENST00000486530 C1QL4Q86Z23 238 aa16.27■□□□□ 0.2
HPS3-206ENST00000486530 SRSF12Q8WXF0 261 aaKnown RBP16.27■□□□□ 0.2
HPS3-206ENST00000486530 SRSF8Q9BRL6 282 aaKnown RBP16.27■□□□□ 0.2
HPS3-206ENST00000486530 SAV1Q9H4B6 383 aaPredicted RBP16.27■□□□□ 0.2
HPS3-206ENST00000486530 DOK5Q9P104 306 aa16.27■□□□□ 0.2
HPS3-206ENST00000486530 YTHDF2Q9Y5A9 579 aaKnown RBP16.27■□□□□ 0.2
HPS3-206ENST00000486530 URGCP-MRPS24S4R325 110 aa16.27■□□□□ 0.2
HPS3-206ENST00000486530 OVOL3O00110 214 aa16.27■□□□□ 0.19
HPS3-206ENST00000486530 KIAA0141Q14154 515 aaPredicted RBP16.27■□□□□ 0.19
HPS3-206ENST00000486530 CCDC144NLQ6NUI1 221 aa16.27■□□□□ 0.19
HPS3-206ENST00000486530 LHFPL4Q7Z7J7 247 aa16.27■□□□□ 0.19
HPS3-206ENST00000486530 C22orf15Q8WYQ4 148 aa16.27■□□□□ 0.19
HPS3-206ENST00000486530 MISP3Q96FF7 219 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms