RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PECRQ9BY49 303 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 MRPS18AQ9NVS2 196 aaKnown RBP5.64□□□□□ -1.51
XRN1-212ENST00000486211 ZNF446Q9NWS9 450 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 SAC3D1A6NKF1 404 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 SNTNA6NMZ2 147 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 F5H768 121 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 I3L2K1 104 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 UPK2O00526 184 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 HRASP01112 189 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 FCGR3AP08637 254 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 HLA-DRB4P13762 266 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 FXYD7P58549 80 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 THOC7Q6I9Y2 204 aaKnown RBP5.63□□□□□ -1.51
XRN1-212ENST00000486211 C1orf158Q8N1D5 194 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 ZFP41Q8N8Y5 198 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 ZNF709Q8N972 641 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 MAFIPQ8WZ33 124 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 RNF125Q96EQ8 232 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 UHRF2Q96PU4 802 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 GPHA2Q96T91 129 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 GINS4Q9BRT9 223 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 HRASLSQ9HDD0 168 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 BABAM2Q9NXR7 383 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 KCNK7Q9Y2U2 307 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 HLA-DRB4X5D2U9 266 aa5.63□□□□□ -1.51
XRN1-212ENST00000486211 IGKV1D-13A0A0B4J2D9 117 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 A0A1B0GU03 582 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 HELTA6NFD8 242 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 J3QRK9 145 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 SCGB1D2O95969 90 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 HBE1P02100 147 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 FGF2P09038 288 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 TRAPPC2P0DI81 140 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 TRAPPC2BP0DI82 140 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 IGKV1-13P0DP09 117 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 CD37P11049 281 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 CD36P16671 472 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 DCKP27707 260 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 P2RY1P47900 373 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 FLOT2Q14254 428 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 POU2AF1Q16633 256 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 ESRGQ1W209 222 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 HSP90B2PQ58FF3 399 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 RBM48Q5RL73 367 aaKnown RBP5.62□□□□□ -1.51
XRN1-212ENST00000486211 TTC23Q5W5X9 447 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 HSD17B13Q7Z5P4 300 aaPredicted RBP5.62□□□□□ -1.51
XRN1-212ENST00000486211 TCTEX1D2Q8WW35 142 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 HSD17B10Q99714 261 aaKnown RBP5.62□□□□□ -1.51
XRN1-212ENST00000486211 TXN2Q99757 166 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 COMMD5Q9GZQ3 224 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 TMEM231Q9H6L2 316 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 MRPS16Q9Y3D3 137 aaKnown RBP5.62□□□□□ -1.51
XRN1-212ENST00000486211 TNFRSF18Q9Y5U5 241 aa5.62□□□□□ -1.51
XRN1-212ENST00000486211 IGKV1D-8A0A087WSZ0 117 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 TEX50A0A1B0GTY4 177 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 LYRM9A8MSI8 78 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 IGHV3-48P01763 117 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 HLA-DQB1P01920 261 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 PRB4P10163 310 aaPredicted RBP5.61□□□□□ -1.51
XRN1-212ENST00000486211 MFAP4P55083 255 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 RCN1Q15293 331 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 RRN3P1Q2M238 152 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 GDF5OSQ5U4N7 250 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 AMIGO2Q86SJ2 522 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 ZNF485Q8NCK3 441 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 SLC25A46Q96AG3 418 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 URM1Q9BTM9 101 aaKnown RBP5.61□□□□□ -1.51
XRN1-212ENST00000486211 MAGT1Q9H0U3 335 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 DCSTAMPQ9H295 470 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 FGF20Q9NP95 211 aaPredicted RBP5.61□□□□□ -1.51
XRN1-212ENST00000486211 NDUFA4L2Q9NRX3 87 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 SPATA2Q9UM82 520 aa5.61□□□□□ -1.51
XRN1-212ENST00000486211 A0A1W2PS18 150 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 FAM90A26D6RGX4 464 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 DEFB130BP0DP73 79 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 DEFB130AP0DP74 79 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 NAT1P18440 290 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 CRYBB3P26998 211 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 DEFB1P60022 68 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 DHRS2Q13268 280 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 KCTD21Q4G0X4 260 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 ACSM3Q53FZ2 586 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 TMPRSS11AQ6ZMR5 421 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 RHOXF1Q8NHV9 184 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 LSM10Q969L4 123 aaKnown RBP5.6□□□□□ -1.51
XRN1-212ENST00000486211 FAM107BQ9H098 131 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 TMEM140Q9NV12 185 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 TAS2R8Q9NYW2 309 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 OAZ3Q9UMX2 235 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 OR2W1Q9Y3N9 320 aa5.6□□□□□ -1.51
XRN1-212ENST00000486211 TNXBP22105 4242 aa5.59□□□□□ -1.51
XRN1-212ENST00000486211 PLAC8L1A1L4L8 177 aa5.59□□□□□ -1.51
XRN1-212ENST00000486211 RBFOX2O43251 390 aaKnown RBP eCLIP5.59□□□□□ -1.51
XRN1-212ENST00000486211 GNG7O60262 68 aa5.59□□□□□ -1.51
XRN1-212ENST00000486211 SLC22A5O76082 557 aa5.59□□□□□ -1.51
XRN1-212ENST00000486211 MT-CO2P00403 227 aa5.59□□□□□ -1.51
XRN1-212ENST00000486211 IGKV3-20P01619 116 aa5.59□□□□□ -1.51
XRN1-212ENST00000486211 PRM2P04554 102 aa5.59□□□□□ -1.51
XRN1-212ENST00000486211 ATP5G1P05496 136 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms