RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 QRFPP83859 136 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 RELQ04864 619 aaPredicted RBP4.56□□□□□ -1.68
SMC4-217ENST00000485867 FLOT2Q14254 428 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 Q56UQ5 140 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 YIF1BQ5BJH7 314 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 TTC32Q5I0X7 151 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 MZT2AQ6P582 158 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 ZNF705AQ6ZN79 300 aaPredicted RBP4.56□□□□□ -1.68
SMC4-217ENST00000485867 GDPD1Q8N9F7 314 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 UBAC2Q8NBM4 344 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 DUSP18Q8NEJ0 188 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 OR4S2Q8NH73 311 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 GRAMD2BQ96HH9 432 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 PGLYRP3Q96LB9 341 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 CMSS1Q9BQ75 279 aaKnown RBP4.56□□□□□ -1.68
SMC4-217ENST00000485867 SRSF8Q9BRL6 282 aaKnown RBP4.56□□□□□ -1.68
SMC4-217ENST00000485867 C1QTNF4Q9BXJ3 329 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 LPAR5Q9H1C0 372 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 VSIRQ9H7M9 311 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 AMBNQ9NP70 447 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 MSRB1Q9NZV6 116 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 RABAC1Q9UI14 185 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 HSF4Q9ULV5 492 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 MRPS7Q9Y2R9 242 aaKnown RBP4.56□□□□□ -1.68
SMC4-217ENST00000485867 PRELID3BQ9Y3B1 194 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 LINC00588Q9Y4M8 146 aa4.56□□□□□ -1.68
SMC4-217ENST00000485867 SMIM9A6NGZ8 99 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 CYB5BO43169 146 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 APOHP02749 345 aaPredicted RBP4.55□□□□□ -1.68
SMC4-217ENST00000485867 EIF4EP06730 217 aaKnown RBP4.55□□□□□ -1.68
SMC4-217ENST00000485867 FGF9P31371 208 aaPredicted RBP4.55□□□□□ -1.68
SMC4-217ENST00000485867 ETV1P50549 477 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 CCL18P55774 89 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 TMEM50BP56557 158 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 BRWD1-AS2P59051 145 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 TIMM50Q3ZCQ8 353 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 HSP90B2PQ58FF3 399 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 C1orf100Q5SVJ3 147 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 TTC23Q5W5X9 447 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 SLC25A24Q6NUK1 477 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 H1FOOQ8IZA3 346 aaPredicted RBP4.55□□□□□ -1.68
SMC4-217ENST00000485867 ZFP41Q8N8Y5 198 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 OR10W1Q8NGF6 305 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 ARHGAP5-AS1Q96IT6 56 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 Q9H3A6 140 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 BET1LQ9NYM9 111 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 RBMX2Q9Y388 322 aaKnown RBP4.55□□□□□ -1.68
SMC4-217ENST00000485867 RFNGQ9Y644 331 aa4.55□□□□□ -1.68
SMC4-217ENST00000485867 TRAV3A0A0B4J244 114 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 IGHV3-66A0A0C4DH42 116 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 SERPINE2P07093 398 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 FCGR3AP08637 254 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 GNB3P16520 340 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 CD36P16671 472 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 TAS2R43P59537 309 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 DAD1P61803 113 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 WT1-ASQ06250 92 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 ZNF773Q6PK81 442 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 TMPRSS11AQ6ZMR5 421 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 Q6ZRN7 208 aaPredicted RBP4.54□□□□□ -1.68
SMC4-217ENST00000485867 FAM89BQ8N5H3 189 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 STXBP6Q8NFX7 210 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 TCTEX1D2Q8WW35 142 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 MAFIPQ8WZ33 124 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 ZNF479Q96JC4 524 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 GINS4Q9BRT9 223 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 GINS3Q9BRX5 216 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 PECRQ9BY49 303 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 NXF2Q9GZY0 626 aaKnown RBP4.54□□□□□ -1.68
SMC4-217ENST00000485867 Q9H8V8 135 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 FGF20Q9NP95 211 aaPredicted RBP4.54□□□□□ -1.68
SMC4-217ENST00000485867 BABAM2Q9NXR7 383 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 ARL2BPQ9Y2Y0 163 aa4.54□□□□□ -1.68
SMC4-217ENST00000485867 PUS1Q9Y606 427 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMC4-217ENST00000485867 F11RQ9Y624 299 aaKnown RBP4.54□□□□□ -1.68
SMC4-217ENST00000485867 FAT3Q8TDW7 4589 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 TMEM272A0A1B0GTI8 110 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 PNMA8CA0A1B0GUJ8 204 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 RPS10-NUDT3A0A1W2PQS6 291 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 J3QRK9 145 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 HRASP01112 189 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 CDK1P06493 297 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 OR13C7P0DN81 318 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 CALB2P22676 271 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 DCKP27707 260 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 ALDH3B2P48448 385 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 NUTF2P61970 127 aaKnown RBP4.53□□□□□ -1.68
SMC4-217ENST00000485867 EIF4EBP1Q13541 118 aaPredicted RBP4.53□□□□□ -1.68
SMC4-217ENST00000485867 USF2Q15853 346 aaPredicted RBP4.53□□□□□ -1.68
SMC4-217ENST00000485867 SSX1Q16384 188 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 THOC7Q6I9Y2 204 aaKnown RBP4.53□□□□□ -1.68
SMC4-217ENST00000485867 TOMM20LQ6UXN7 152 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 GSG1LQ6UXU4 331 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 SSX7Q7RTT5 188 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 CBR4Q8N4T8 237 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 DCANP1Q8TF63 244 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 RAB40CQ96S21 281 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 HSD17B10Q99714 261 aaKnown RBP4.53□□□□□ -1.68
SMC4-217ENST00000485867 URM1Q9BTM9 101 aaKnown RBP4.53□□□□□ -1.68
SMC4-217ENST00000485867 COMMD5Q9GZQ3 224 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms