RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ELK1P19419 428 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 LHFPL1Q86WI0 220 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 SNX29P2Q8IUI4 249 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 MRGPRFQ96AM1 343 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 FUNDC2Q9BWH2 189 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 CSTL1Q9H114 145 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 NCS1P62166 190 aa8.44□□□□□ -1.06
SCFD1-206ENST00000484733 PMS2P11Q13670 270 aa8.44□□□□□ -1.06
SCFD1-206ENST00000484733 GINS3Q9BRX5 216 aa8.44□□□□□ -1.06
SCFD1-206ENST00000484733 VSIRQ9H7M9 311 aa8.44□□□□□ -1.06
SCFD1-206ENST00000484733 MPTX1A8MV57 137 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 GNG7O60262 68 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 HPGDSO60760 199 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 ATG12O94817 140 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 YIF1AO95070 293 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 NPBWR1P48145 328 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 RORCP51449 518 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 PAFAH1B2P68402 229 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 MZT2AQ6P582 158 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 APRG1Q8IVJ8 170 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 ARRDC1Q8N5I2 433 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 DUSP18Q8NEJ0 188 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 DFFBO76075 338 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 IGKV1-5P01602 117 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 TBPP20226 339 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 VBP1P61758 197 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 TOMM20LQ6UXN7 152 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 ZNF600Q6ZNG1 722 aa8.43□□□□□ -1.06
SCFD1-206ENST00000484733 M0QYG6 137 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 CORTO00230 105 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 TMEM50AO95807 157 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 LY6G6CO95867 125 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 TCF24Q7RTU0 167 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 A0A0B4J293 547 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 B3GALNT1O75752 331 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 PGAM2P15259 253 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 SUB1P53999 127 aaKnown RBP eCLIP8.42□□□□□ -1.061e-7■■■■□ 20.1
SCFD1-206ENST00000484733 RNASE10Q5GAN6 216 aaKnown RBP8.42□□□□□ -1.06
SCFD1-206ENST00000484733 C15orf40Q8WUR7 153 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 PINX1Q96BK5 328 aaKnown RBP8.42□□□□□ -1.06
SCFD1-206ENST00000484733 C11orf68Q9H3H3 251 aaKnown RBP8.42□□□□□ -1.06
SCFD1-206ENST00000484733 ZFAND3Q9H8U3 227 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 MTFP1Q9UDX5 166 aa8.42□□□□□ -1.06
SCFD1-206ENST00000484733 C3orf85A0A1B0GTC6 90 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 SNCAP37840 140 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 RPL5P46777 297 aaKnown RBP8.41□□□□□ -1.06
SCFD1-206ENST00000484733 PIGPP57054 158 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 SLC35G3Q8N808 338 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 ZFAND1Q8TCF1 268 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 ST8SIA2Q92186 375 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 TP53RKQ96S44 253 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 TMEM231Q9H6L2 316 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 IGHV3-49A0A0A0MS15 119 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 FAM25AB3EWG3 89 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 FAM25CB3EWG5 89 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 FAM25GB3EWG6 89 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 ST8SIA3O43173 380 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 IGHV3-48P01763 117 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 CD74P04233 296 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 RNASE2P10153 161 aaKnown RBP8.41□□□□□ -1.06
SCFD1-206ENST00000484733 ZNF182P17025 639 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-206ENST00000484733 TFPI2P48307 235 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 ZNF124Q15973 351 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 TMEM229BQ8NBD8 167 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 PHLDA1Q8WV24 401 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-206ENST00000484733 AP3S1Q92572 193 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 RARRES2Q99969 163 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 KLK11Q9UBX7 282 aa8.41□□□□□ -1.06
SCFD1-206ENST00000484733 CD3DP04234 171 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 UCP1P25874 307 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 IZUMO4Q1ZYL8 232 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 BSXQ3C1V8 233 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 AARDQ4LEZ3 155 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 CCDC71LQ8N9Z2 235 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 OR52I2Q8NH67 350 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 TERB2Q8NHR7 220 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 MFFQ9GZY8 342 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 MS4A6AQ9H2W1 248 aa8.4□□□□□ -1.06
SCFD1-206ENST00000484733 PUS1Q9Y606 427 aaKnown RBP eCLIP8.4□□□□□ -1.06
SCFD1-206ENST00000484733 IFNA17P01571 189 aa8.4□□□□□ -1.07
SCFD1-206ENST00000484733 APOHP02749 345 aaPredicted RBP8.4□□□□□ -1.07
SCFD1-206ENST00000484733 LILRB2Q8N423 598 aa8.4□□□□□ -1.07
SCFD1-206ENST00000484733 GBGT1Q8N5D6 347 aa8.4□□□□□ -1.07
SCFD1-206ENST00000484733 OR4X1Q8NH49 305 aa8.4□□□□□ -1.07
SCFD1-206ENST00000484733 PDCD10Q9BUL8 212 aa8.4□□□□□ -1.07
SCFD1-206ENST00000484733 A0A1B0GU03 582 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 A0A1W2PS18 150 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 DNASE2O00115 360 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-206ENST00000484733 CLN5O75503 358 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 GABARAPO95166 117 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 PI3P19957 117 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 AKR1C2P52895 323 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 SSBP1Q04837 148 aaKnown RBP8.39□□□□□ -1.07
SCFD1-206ENST00000484733 CTF1Q16619 201 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 SPINK9Q5DT21 86 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 LGALS9CQ6DKI2 356 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 FAM219AQ8IW50 185 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 OR52E5Q8NH55 327 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 COPZ2Q9P299 210 aa8.39□□□□□ -1.07
SCFD1-206ENST00000484733 EXTL2Q9UBQ6 330 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms