RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 HOXA1P49639 335 aaPredicted RBP16.79■□□□□ 0.28
CNTNAP3B-208ENST00000484254 SRPXP78539 464 aa16.79■□□□□ 0.28
CNTNAP3B-208ENST00000484254 TMEM128Q5BJH2 165 aa16.79■□□□□ 0.28
CNTNAP3B-208ENST00000484254 LCN12Q6JVE5 192 aa16.79■□□□□ 0.28
CNTNAP3B-208ENST00000484254 ZNF436Q9C0F3 470 aaPredicted RBP16.79■□□□□ 0.28
CNTNAP3B-208ENST00000484254 ENY2Q9NPA8 101 aa16.79■□□□□ 0.28
CNTNAP3B-208ENST00000484254 A0A0B4J2A0 478 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 TMEM213A2RRL7 107 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 NAP1L6A6NFF2 107 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 MT-CO2P00403 227 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 EDN2P20800 178 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 CBLN1P23435 193 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 SUB1P53999 127 aaKnown RBP eCLIP16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 Q56UQ5 140 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 PVRIGQ6DKI7 326 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 UNQ9165/PRO28630Q6UXU0 137 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 LGI3Q8N145 548 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 UBAC2Q8NBM4 344 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 DYNLRB2Q8TF09 96 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 PALMDQ9NP74 551 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 GAR1Q9NY12 217 aaKnown RBP16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 SHPKQ9UHJ6 478 aa16.78■□□□□ 0.28
CNTNAP3B-208ENST00000484254 IGHV3-35A0A0C4DH35 117 aa16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 SULT1A3P0DMM9 295 aa16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 SULT1A4P0DMN0 295 aa16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 RNASE2P10153 161 aaKnown RBP16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 FCGR2BP31994 310 aaPredicted RBP16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 MFAP4P55083 255 aa16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 RBMS2Q15434 407 aaKnown RBP16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 DEFB114Q30KQ6 69 aa16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 LYZL2Q7Z4W2 148 aa16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 TXN2Q99757 166 aa16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 CHRDL1Q9BU40 450 aa16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 TECRQ9NZ01 308 aaKnown RBP16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 CACFD1Q9UGQ2 172 aa16.77■□□□□ 0.28
CNTNAP3B-208ENST00000484254 COL7A1Q02388 2944 aa16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 PIGBOS1A0A0B4J2F0 54 aa16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 IZUMO1RA6ND01 250 aa16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 ADMP35318 185 aa16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 CCR6P51684 374 aa16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 ELLP55199 621 aaPredicted RBP16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 CD300EQ496F6 205 aaPredicted RBP16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 NMSQ5H8A3 153 aa16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 Q8N1Y9 231 aa16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 CACNG8Q8WXS5 425 aa16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 PINX1Q96BK5 328 aaKnown RBP16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 UFC1Q9Y3C8 167 aa16.76■□□□□ 0.27
CNTNAP3B-208ENST00000484254 CORTO00230 105 aa16.75■□□□□ 0.27
CNTNAP3B-208ENST00000484254 CTSGP08311 255 aa16.75■□□□□ 0.27
CNTNAP3B-208ENST00000484254 IL7P13232 177 aa16.75■□□□□ 0.27
CNTNAP3B-208ENST00000484254 BSXQ3C1V8 233 aa16.75■□□□□ 0.27
CNTNAP3B-208ENST00000484254 TM4SF20Q53R12 229 aa16.75■□□□□ 0.27
CNTNAP3B-208ENST00000484254 CENPSQ8N2Z9 138 aa16.75■□□□□ 0.27
CNTNAP3B-208ENST00000484254 TMEM190Q8WZ59 177 aa16.75■□□□□ 0.27
CNTNAP3B-208ENST00000484254 DUXBA0A1W2PPF3 345 aa16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 NDUFA4O00483 81 aa16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 IGHV3-48P01763 117 aa16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 C8orf88P0DMB2 117 aa16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 VAMP1P23763 118 aa16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 SMCO1Q147U7 214 aa16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 LRTM2Q8N967 370 aa16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 UXS1Q8NBZ7 420 aa16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 MARC2Q969Z3 335 aa16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 C7orf50Q9BRJ6 194 aaKnown RBP16.74■□□□□ 0.27
CNTNAP3B-208ENST00000484254 LINC00854A0A1B0GVQ3 168 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 A6NHS1 94 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 CENPXA8MT69 81 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 NUPL2O15504 423 aaKnown RBP16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 NDUFB6O95139 128 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 SFT2D2O95562 160 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 HTR2BP41595 481 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 PPP1R1AQ13522 171 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 ANKRD55Q3KP44 614 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 HEYLQ9NQ87 328 aaPredicted RBP16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 MRPL27Q9P0M9 148 aaKnown RBP16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 MLXQ9UH92 298 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 DNAH9Q9NYC9 4486 aa16.73■□□□□ 0.27
CNTNAP3B-208ENST00000484254 ZNF785A8K8V0 405 aa16.72■□□□□ 0.27
CNTNAP3B-208ENST00000484254 CEBPZOSA8MTT3 80 aa16.72■□□□□ 0.27
CNTNAP3B-208ENST00000484254 NHLRC4P0CG21 123 aaPredicted RBP16.72■□□□□ 0.27
CNTNAP3B-208ENST00000484254 UBE2MP61081 183 aaKnown RBP16.72■□□□□ 0.27
CNTNAP3B-208ENST00000484254 RELQ04864 619 aaPredicted RBP16.72■□□□□ 0.27
CNTNAP3B-208ENST00000484254 LINC00299Q6ZSB3 139 aa16.72■□□□□ 0.27
CNTNAP3B-208ENST00000484254 DUSP18Q8NEJ0 188 aa16.72■□□□□ 0.27
CNTNAP3B-208ENST00000484254 A0A1B0GU03 582 aa16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 GNG7O60262 68 aa16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 NXPH3O95157 252 aa16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 BTCP35070 178 aa16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 NPBWR1P48145 328 aa16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 TNFRSF9Q07011 255 aa16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 GTSCR1Q86UQ5 136 aa16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 ZNF414Q96IQ9 312 aa16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 DAZ1Q9NQZ3 744 aaKnown RBP16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 HSPB7Q9UBY9 170 aa16.71■□□□□ 0.27
CNTNAP3B-208ENST00000484254 K7EMT4 169 aa16.7■□□□□ 0.26
CNTNAP3B-208ENST00000484254 FRMD6-AS1P0C7T7 363 aa16.7■□□□□ 0.26
CNTNAP3B-208ENST00000484254 CNPY1Q3B7I2 92 aa16.7■□□□□ 0.26
CNTNAP3B-208ENST00000484254 C2orf83Q53S99 150 aa16.7■□□□□ 0.26
CNTNAP3B-208ENST00000484254 C20orf24Q9BUV8 137 aa16.7■□□□□ 0.26
CNTNAP3B-208ENST00000484254 HIPK2Q9H2X6 1198 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms