RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SNX29P2Q8IUI4 249 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 CCDC71LQ8N9Z2 235 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 OR4A16Q8NH70 328 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF502Q8TBZ5 544 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 TXN2Q99757 166 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 THAP7Q9BT49 309 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 MRPS26Q9BYN8 205 aaKnown RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 DAZ1Q9NQZ3 744 aaKnown RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 NDUFA4L2Q9NRX3 87 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 TMEM14BQ9NUH8 114 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 OR51B2Q9Y5P1 312 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 F11RQ9Y624 299 aaKnown RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 TEX50A0A1B0GTY4 177 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 C15orf61A6NNL5 157 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 E7EUB6 86 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 K7EMT4 169 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 M0QYG6 137 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 CORTO00230 105 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 NDUFA4O00483 81 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 NUPL2O15504 423 aaKnown RBP4.65□□□□□ -1.67
PTCD3-215ENST00000484203 TGOLN2O43493 480 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 PTHLHP12272 177 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 PGAM2P15259 253 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 ELK1P19419 428 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 FCGR2BP31994 310 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-215ENST00000484203 SNCAP37840 140 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 NPBWR1P48145 328 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 SUB1P53999 127 aaKnown RBP eCLIP4.65□□□□□ -1.67
PTCD3-215ENST00000484203 TAS2R19P59542 299 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 CD81P60033 236 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 SURF2Q15527 256 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-215ENST00000484203 CTF1Q16619 201 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 GUCA2BQ16661 112 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 SLC25A24Q6NUK1 477 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 TBC1D26Q86UD7 250 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 FAM219AQ8IW50 185 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 UXS1Q8NBZ7 420 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 TERB2Q8NHR7 220 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 RAB2BQ8WUD1 216 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 SCGB3A2Q96PL1 93 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 SPAG8Q99932 426 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-215ENST00000484203 NEURL2Q9BR09 285 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 PDCD10Q9BUL8 212 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 HINT2Q9BX68 163 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 ZNF436Q9C0F3 470 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-215ENST00000484203 C5orf66Q9H5L9 145 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 PLEKHA3Q9HB20 300 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 C21orf62Q9NYP8 219 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 COPZ2Q9P299 210 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 MTFP1Q9UDX5 166 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 DMRT1Q9Y5R6 373 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 CEPT1Q9Y6K0 416 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 TNCP24821 2201 aa4.65□□□□□ -1.67
PTCD3-215ENST00000484203 A0A1B0GW64 132 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 TMEM213A2RRL7 107 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 OR4C46A6NHA9 309 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 C15orf62A8K5M9 175 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 OR11H12B2RN74 326 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 PPP5D1E7EU14 171 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 INS-IGF2F8WCM5 200 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 GABARAPH6UMI1 98 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 RGS5O15539 181 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 HPGDSO60760 199 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 CD74P04233 296 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 REG1AP05451 166 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 C8orf88P0DMB2 117 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 GPR183P32249 361 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 G6PCP35575 357 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 TGFBR1P36897 503 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 TMBIM6P55061 237 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 MFAP4P55083 255 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 PIGPP57054 158 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 HSPE1P61604 102 aaKnown RBP4.64□□□□□ -1.67
PTCD3-215ENST00000484203 PRCDQ00LT1 54 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 DEFA5Q01523 94 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 WT1-ASQ06250 92 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 HAGHQ16775 308 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 ZNF585BQ52M93 769 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 PHLDA2Q53GA4 152 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 HAPLN4Q86UW8 402 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 TMEM229BQ8NBD8 167 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 ZNF114Q8NC26 417 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 OR52B4Q8NGK2 314 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 TMEM190Q8WZ59 177 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 LINC00476Q8WZB0 136 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 RRNAD1Q96FB5 475 aaKnown RBP4.64□□□□□ -1.67
PTCD3-215ENST00000484203 SEC22AQ96IW7 307 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 ABHD1Q96SE0 405 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 FAM110AQ9BQ89 295 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 C6orf62Q9GZU0 229 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-215ENST00000484203 FXYD6Q9H0Q3 95 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 ENY2Q9NPA8 101 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 EXTL2Q9UBQ6 330 aa4.64□□□□□ -1.67
PTCD3-215ENST00000484203 RSL24D1Q9UHA3 163 aaKnown RBP4.64□□□□□ -1.67
PTCD3-215ENST00000484203 TRAV3A0A0B4J244 114 aa4.63□□□□□ -1.67
PTCD3-215ENST00000484203 C3orf85A0A1B0GTC6 90 aa4.63□□□□□ -1.67
PTCD3-215ENST00000484203 MFSD2BA6NFX1 497 aa4.63□□□□□ -1.67
PTCD3-215ENST00000484203 OR2T8A6NH00 312 aa4.63□□□□□ -1.67
PTCD3-215ENST00000484203 CGB1A6NKQ9 187 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms