RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 PRR26Q8N8Z3 221 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 TMEM167AQ8TBQ9 72 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 ZNF502Q8TBZ5 544 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 TMEM203Q969S6 136 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 FAM210AQ96ND0 272 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 GFI1Q99684 422 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 FUNDC2Q9BWH2 189 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 ZNF436Q9C0F3 470 aaPredicted RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 SCN3BQ9NY72 215 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 THYN1Q9P016 225 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 SPATA2Q9UM82 520 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 KCNK7Q9Y2U2 307 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 TPRKBQ9Y3C4 175 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 DNAH6Q9C0G6 4158 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 VPS13DQ5THJ4 4388 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 IGHV4-4A0A075B6R2 117 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 IGKV1D-8A0A087WSZ0 117 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 C11orf94C9JXX5 98 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 ZNF701M0R085 212 aaPredicted RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 M0R2N4 97 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 TGOLN2O43493 480 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 PRSS2P07478 247 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 UCHL1P09936 223 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 HLA-GP17693 338 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 NFYAP23511 347 aaPredicted RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 GADD45AP24522 165 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 PSMB9P28065 219 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 TMBIM6P55061 237 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 RPL8P62917 257 aaKnown RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 PLA2G7Q13093 441 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 C2orf76Q3KRA6 126 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 PUSL1Q8N0Z8 303 aaKnown RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 UBAC2Q8NBM4 344 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 FAM3DQ96BQ1 224 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 MND1Q9BWT6 205 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 DUSP21Q9H596 190 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 HRASLSQ9HDD0 168 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 TAS2R8Q9NYW2 309 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 PSORS1C1Q9UIG5 152 aa4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 RBMX2Q9Y388 322 aaKnown RBP4.36□□□□□ -1.71
SEMA3D-204ENST00000484038 IGHV3-49A0A0A0MS15 119 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 IGHV3-21A0A0B4J1V1 117 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 MFNGO00587 321 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 HRASP01112 189 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 HIST1H1DP16402 221 aaKnown RBP4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 PTBP1P26599 531 aaKnown RBP eCLIP4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 TGFBR1P36897 503 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 VBP1P61758 197 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 TMEM187Q14656 261 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 TIMM50Q3ZCQ8 353 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 HES5Q5TA89 166 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 LIPKQ5VXJ0 399 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 CENPSQ8N2Z9 138 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 GBGT1Q8N5D6 347 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 OR10R2Q8NGX6 335 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 RAB2BQ8WUD1 216 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 UFD1Q92890 307 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 YIPF6Q96EC8 236 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 BSCL2Q96G97 398 aaPredicted RBP4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 RNF2Q99496 336 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 HSD17B10Q99714 261 aaKnown RBP4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 CENPOQ9BU64 300 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 ACOT13Q9NPJ3 140 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 RAB22AQ9UL26 194 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 OR2W1Q9Y3N9 320 aa4.35□□□□□ -1.71
SEMA3D-204ENST00000484038 TRAV10A0A0B4J240 114 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 IGKV1D-13A0A0B4J2D9 117 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 IGLC7A0M8Q6 106 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 NDUFA4O00483 81 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 RTL8CO15255 209 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 CYB5BO43169 146 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 TNFSF12O43508 249 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 MRPS14O60783 128 aaKnown RBP4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 ARL6IP5O75915 188 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 SLC22A5O76082 557 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 HSMCR30P0CW71 290 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 IGKV1-13P0DP09 117 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 CD37P11049 281 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 HLA-DMBP28068 263 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 OR2B8PP59922 312 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 NCS1P62166 190 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 SPHARQ15513 63 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 CTF1Q16619 201 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 KLK9Q2XQG4 91 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 LEMD1Q68G75 181 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 Q6ZTC4 211 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 PRSS48Q7RTY5 328 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 NR2C2APQ86WQ0 139 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 Q8NAQ8 132 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 OR10W1Q8NGF6 305 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 TMEM18Q96B42 140 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 CMTM3Q96MX0 182 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 CHRDL1Q9BU40 450 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 COMMD5Q9GZQ3 224 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 KLK9Q9UKQ9 250 aa4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 ELF5Q9UKW6 265 aaPredicted RBP4.34□□□□□ -1.71
SEMA3D-204ENST00000484038 IGHV3OR16-13A0A075B7E8 117 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 IGHV3-74A0A0B4J1X5 117 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 IGHV4-28A0A0C4DH34 117 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms