RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 OR10W1Q8NGF6 305 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 ZNF48Q96MX3 618 aaPredicted RBP11.05□□□□□ -0.64
SMAD9-204ENST00000483941 ATP5SQ99766 215 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 ZNF471Q9BX82 626 aaPredicted RBP11.05□□□□□ -0.64
SMAD9-204ENST00000483941 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 FBXL17Q9UF56 701 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 ZNF580Q9UK33 172 aa11.05□□□□□ -0.64
SMAD9-204ENST00000483941 CGB1A6NKQ9 187 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 TRIM77I1YAP6 450 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 IGHG2P01859 326 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 IGF1P05019 195 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 CRYGCP07315 174 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 RNASE2P10153 161 aaKnown RBP11.04□□□□□ -0.64
SMAD9-204ENST00000483941 TPT1P13693 172 aaKnown RBP11.04□□□□□ -0.64
SMAD9-204ENST00000483941 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
SMAD9-204ENST00000483941 CRIP2P52943 208 aaPredicted RBP11.04□□□□□ -0.64
SMAD9-204ENST00000483941 UBA52P62987 128 aaKnown RBP11.04□□□□□ -0.64
SMAD9-204ENST00000483941 DLK1P80370 383 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 OR8G2PQ6IF36 304 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 SLC25A24Q6NUK1 477 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 SCGB1C1Q8TD33 95 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 OR4C12Q96R67 309 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 SLA2Q9H6Q3 261 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 PARP11Q9NR21 331 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 F11RQ9Y624 299 aaKnown RBP11.04□□□□□ -0.64
SMAD9-204ENST00000483941 TNCP24821 2201 aa11.04□□□□□ -0.64
SMAD9-204ENST00000483941 E7EUB6 86 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 AP4M1O00189 453 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 CTRB1P17538 263 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 SSBP2P81877 361 aaPredicted RBP11.03□□□□□ -0.64
SMAD9-204ENST00000483941 RAB31Q13636 194 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 FBLN7Q53RD9 439 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 C9orf152Q5JTZ5 239 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 CTRB2Q6GPI1 263 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 UBAC2Q8NBM4 344 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 STOML3Q8TAV4 291 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 P2RX4Q99571 388 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 PARD6GQ9BYG4 376 aaPredicted RBP11.03□□□□□ -0.64
SMAD9-204ENST00000483941 UQCC1Q9NVA1 299 aa11.03□□□□□ -0.64
SMAD9-204ENST00000483941 SOX15O60248 233 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 MPDU1O75352 247 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 SCGB2A1O75556 95 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 AMY1AP04745 511 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 AREGP15514 252 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 CLINT1Q14677 625 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 ARSJQ5FYB0 599 aaPredicted RBP11.02□□□□□ -0.65
SMAD9-204ENST00000483941 PVRIGQ6DKI7 326 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 UNQ5815/PRO19632Q6UWF5 114 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 C3orf56Q8N813 242 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 LFNGQ8NES3 379 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
SMAD9-204ENST00000483941 PHYHIPLQ96FC7 376 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 HSPB9Q9BQS6 159 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 SMIM3Q9BZL3 60 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 WNT10AQ9GZT5 417 aa11.02□□□□□ -0.65
SMAD9-204ENST00000483941 TRAV41A0A0B4J266 112 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 A0A1B0GW64 132 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 PMS2P5A8MQ11 134 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 H3BUA1 57 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 ATP6V0E1O15342 81 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 FBXO24O75426 580 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 IFNA7P01567 189 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 CRYBA1P05813 215 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 BAP18Q8IXM2 172 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 FAM110DQ8TAY7 271 aaPredicted RBP11.01□□□□□ -0.65
SMAD9-204ENST00000483941 SLC35E1Q96K37 410 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 FAM103A1Q9BTL3 118 aaKnown RBP11.01□□□□□ -0.65
SMAD9-204ENST00000483941 NPVFQ9HCQ7 196 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 KCNIP2Q9NS61 270 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
SMAD9-204ENST00000483941 BRI3O95415 125 aa11□□□□□ -0.65
SMAD9-204ENST00000483941 OPRK1P41145 380 aa11□□□□□ -0.65
SMAD9-204ENST00000483941 BLCAPP62952 87 aa11□□□□□ -0.65
SMAD9-204ENST00000483941 CD69Q07108 199 aa11□□□□□ -0.65
SMAD9-204ENST00000483941 VWC2Q2TAL6 325 aa11□□□□□ -0.65
SMAD9-204ENST00000483941 ZNF709Q8N972 641 aa11□□□□□ -0.65
SMAD9-204ENST00000483941 ST8SIA2Q92186 375 aa11□□□□□ -0.65
SMAD9-204ENST00000483941 TNFRSF19Q9NS68 423 aa11□□□□□ -0.65
SMAD9-204ENST00000483941 C17orf112F2Z3M2 114 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 REG1AP05451 166 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 EGR2P11161 476 aaPredicted RBP10.99□□□□□ -0.65
SMAD9-204ENST00000483941 HILS1P60008 231 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 SLC35B1P78383 322 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 NDPQ00604 133 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 ECSCRQ19T08 205 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 KLK9Q2XQG4 91 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 RPL7L1Q6DKI1 246 aaKnown RBP10.99□□□□□ -0.65
SMAD9-204ENST00000483941 ZNF767PQ75MW2 155 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 TMEM170AQ8WVE7 144 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 MISP3Q96FF7 219 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 CYTL1Q9NRR1 136 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 GAR1Q9NY12 217 aaKnown RBP10.99□□□□□ -0.65
SMAD9-204ENST00000483941 KLK9Q9UKQ9 250 aa10.99□□□□□ -0.65
SMAD9-204ENST00000483941 SMCO3A2RU48 225 aa10.98□□□□□ -0.65
SMAD9-204ENST00000483941 TMEM89A2RUT3 159 aa10.98□□□□□ -0.65
SMAD9-204ENST00000483941 DNAJC9-AS1A6NH13 148 aa10.98□□□□□ -0.65
SMAD9-204ENST00000483941 PRSS46E5RG02 174 aa10.98□□□□□ -0.65
SMAD9-204ENST00000483941 RNASE1P07998 156 aaKnown RBP10.98□□□□□ -0.65
SMAD9-204ENST00000483941 APELAP0DMC3 54 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms