RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ZNF818PQ6ZRF7 136 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 PACRGLQ8N7B6 248 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 ZBTB34Q8NCN2 500 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 STXBP6Q8NFX7 210 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 OR1P1Q8NH06 330 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 GINS3Q9BRX5 216 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 COMMD9Q9P000 198 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 A0A1B0GU03 582 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 SMIM30A4D0T7 59 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 ERICH4A6NGS2 130 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 GNG7O60262 68 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 EMP1P54849 157 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 FXYD4P59646 89 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 GNG2P59768 71 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 MLLT11Q13015 90 aaPredicted RBP7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 AADACL3Q5VUY0 350 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 GRAMD2BQ96HH9 432 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 TXN2Q99757 166 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 XCL2Q9UBD3 114 aa7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 PUS1Q9Y606 427 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMARCC1-205ENST00000483847 TRAV1-2A0A0B4J238 106 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 PDCD5O14737 125 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 KRASP01116 189 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 FCER2P06734 321 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 G6PCP35575 357 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 ARPC4P59998 168 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 ERVK-16P61578 105 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 RCN1Q15293 331 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 TMEM17Q86X19 198 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 BEST4Q8NFU0 473 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 DCANP1Q8TF63 244 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 PINX1Q96BK5 328 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 TMEM56Q96MV1 263 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 RAB40CQ96S21 281 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 ACOT13Q9NPJ3 140 aa7.72□□□□□ -1.17
SMARCC1-205ENST00000483847 SNAPC5O75971 98 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 RLN1P04808 185 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 SPART-AS1P0CW21 52 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 HTN3P15516 51 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 RAB3BP20337 219 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 LPAR6P43657 344 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 ZNF367Q7RTV3 350 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 FCAMRQ8WWV6 532 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 FAM210BQ96KR6 192 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 MGLLQ99685 303 aa7.71□□□□□ -1.18
SMARCC1-205ENST00000483847 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 CASQ2O14958 399 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 F2RP25116 425 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 GNRHRP30968 328 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 P2RY1P47900 373 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 PSMG4Q5JS54 123 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 TMEM88Q6PEY1 159 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 ZNF705AQ6ZN79 300 aaPredicted RBP7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 ZNF600Q6ZNG1 722 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 MOB3AQ96BX8 217 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 TMEM231Q9H6L2 316 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 C8orf4Q9NR00 106 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 SCN3BQ9NY72 215 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 PRNDQ9UKY0 176 aa7.7□□□□□ -1.18
SMARCC1-205ENST00000483847 ZNF705FA8MVS1 300 aaPredicted RBP7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 ZNF705DP0CH99 300 aaPredicted RBP7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 ZNF705BP0CI00 300 aaPredicted RBP7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 NPPCP23582 126 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 PPP5CP53041 499 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 FAM222AQ5U5X8 452 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 SPATA12Q7Z6I5 190 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 HOGA1Q86XE5 327 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 C6orf223Q8N319 242 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 ZNF114Q8NC26 417 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 C1QTNF4Q9BXJ3 329 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 YTHDF1Q9BYJ9 559 aaKnown RBP7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 DUSP21Q9H596 190 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 MRPL36Q9P0J6 103 aaKnown RBP7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 DKK2Q9UBU2 259 aa7.69□□□□□ -1.18
SMARCC1-205ENST00000483847 NBDYA0A0U1RRE5 68 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 PGLYRP1O75594 196 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 TMEM50AO95807 157 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 MYL9P24844 172 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 CRYBB3P26998 211 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 DHRS2Q13268 280 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 TPRA1Q86W33 373 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 CADM3Q8N126 398 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 NEU1Q99519 415 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 NIPSNAP3BQ9BS92 247 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 CCDC90BQ9GZT6 254 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 FKBP11Q9NYL4 201 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 FAT1Q14517 4588 aa7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 SRRM2Q9UQ35 2752 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-205ENST00000483847 IGHV3OR16-12A0A075B7B8 117 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 A0A1W2PS18 150 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 TMEM189A5PLL7 270 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 HELTA6NFD8 242 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 H3BMM0 161 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 RGS10O43665 173 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 FGF9P31371 208 aaPredicted RBP7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 NPBWR1P48145 328 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 FXYD7P58549 80 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 DEFB1P60022 68 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 KRTAP10-2P60368 255 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 SPINK9Q5DT21 86 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms