RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 ERHP84090 104 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 IZUMO4Q1ZYL8 232 aa12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 SPINK9Q5DT21 86 aa12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 OR10C1Q96KK4 312 aa12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 CMTM3Q96MX0 182 aa12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 NXF2Q9GZY0 626 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-209ENST00000483002 HPGDSO60760 199 aa12.22□□□□□ -0.45
RAB11FIP3-209ENST00000483002 PGAM2P15259 253 aa12.22□□□□□ -0.45
RAB11FIP3-209ENST00000483002 CMC4P56277 68 aaPredicted RBP12.22□□□□□ -0.45
RAB11FIP3-209ENST00000483002 TMEM217Q8N7C4 229 aa12.22□□□□□ -0.45
RAB11FIP3-209ENST00000483002 ZNF114Q8NC26 417 aa12.22□□□□□ -0.45
RAB11FIP3-209ENST00000483002 FUNDC2Q9BWH2 189 aa12.22□□□□□ -0.45
RAB11FIP3-209ENST00000483002 CSTL1Q9H114 145 aa12.22□□□□□ -0.45
RAB11FIP3-209ENST00000483002 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
RAB11FIP3-209ENST00000483002 ALMS1Q8TCU4 4167 aa12.22□□□□□ -0.45
RAB11FIP3-209ENST00000483002 TNFAIP8O95379 198 aa12.21□□□□□ -0.45
RAB11FIP3-209ENST00000483002 PI3P19957 117 aa12.21□□□□□ -0.45
RAB11FIP3-209ENST00000483002 RNASE12Q5GAN4 147 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-209ENST00000483002 MPTX1A8MV57 137 aa12.2□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ATF4P18848 351 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-209ENST00000483002 SNCAP37840 140 aa12.2□□□□□ -0.46
RAB11FIP3-209ENST00000483002 PAFAH1B2P68402 229 aa12.2□□□□□ -0.46
RAB11FIP3-209ENST00000483002 FAM90A2PQ658T7 463 aa12.2□□□□□ -0.46
RAB11FIP3-209ENST00000483002 TOMM20LQ6UXN7 152 aa12.2□□□□□ -0.46
RAB11FIP3-209ENST00000483002 TCF24Q7RTU0 167 aa12.2□□□□□ -0.46
RAB11FIP3-209ENST00000483002 DUSP18Q8NEJ0 188 aa12.2□□□□□ -0.46
RAB11FIP3-209ENST00000483002 GINS3Q9BRX5 216 aa12.2□□□□□ -0.46
RAB11FIP3-209ENST00000483002 IGHV3-66A0A0C4DH42 116 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 FAM25AB3EWG3 89 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 FAM25CB3EWG5 89 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 FAM25GB3EWG6 89 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 NPBWR1P48145 328 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 RORCP51449 518 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 PIGPP57054 158 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 LILRB2Q8N423 598 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ST8SIA2Q92186 375 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 RARRES2Q99969 163 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 KLK11Q9UBX7 282 aa12.19□□□□□ -0.46
RAB11FIP3-209ENST00000483002 A0A0B4J293 547 aa12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ST8SIA3O43173 380 aa12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 IFNA17P01571 189 aa12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 IGKV1-5P01602 117 aa12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 APOHP02749 345 aaPredicted RBP12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 AKR1C2P52895 323 aa12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 RPL11P62913 178 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 RNASE10Q5GAN6 216 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 SLC35G3Q8N808 338 aa12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 PHLDA1Q8WV24 401 aaPredicted RBP12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 TP53RKQ96S44 253 aa12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 PUS1Q9Y606 427 aaKnown RBP eCLIP12.18□□□□□ -0.46
RAB11FIP3-209ENST00000483002 DFFBO76075 338 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 TMEM50AO95807 157 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 CD3DP04234 171 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 CD5P06127 495 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ETV6P41212 452 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 RND3P61587 244 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 SP6Q3SY56 376 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 MZT2AQ6P582 158 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ZNF600Q6ZNG1 722 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 OR11H2Q8NH07 326 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 OR52I2Q8NH67 350 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 GATAD1Q8WUU5 269 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ZNF486Q96H40 463 aaPredicted RBP12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 PDCD10Q9BUL8 212 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 MS4A6AQ9H2W1 248 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 VSIRQ9H7M9 311 aa12.17□□□□□ -0.46
RAB11FIP3-209ENST00000483002 C3orf85A0A1B0GTC6 90 aa12.16□□□□□ -0.46
RAB11FIP3-209ENST00000483002 SUB1P53999 127 aaKnown RBP eCLIP12.16□□□□□ -0.46
RAB11FIP3-209ENST00000483002 DEFB131AP59861 70 aa12.16□□□□□ -0.46
RAB11FIP3-209ENST00000483002 TRIM16LQ309B1 348 aa12.16□□□□□ -0.46
RAB11FIP3-209ENST00000483002 LEMD1Q68G75 181 aa12.16□□□□□ -0.46
RAB11FIP3-209ENST00000483002 LHFPL1Q86WI0 220 aa12.16□□□□□ -0.46
RAB11FIP3-209ENST00000483002 A0A1B0GU03 582 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ATG12O94817 140 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 CA1P00915 261 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 P0C879 139 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 RNASE2P10153 161 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 HOXA1P49639 335 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 PPP5CP53041 499 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 NANOS2P60321 138 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 MLANAQ16655 118 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ARRDC1Q8N5I2 433 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ZFAND3Q9H8U3 227 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 ENY2Q9NPA8 101 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 COPZ2Q9P299 210 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 EXTL2Q9UBQ6 330 aa12.15□□□□□ -0.46
RAB11FIP3-209ENST00000483002 INS-IGF2F8WCM5 200 aa12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 NPPCP23582 126 aa12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 SCGB2B2Q4G0G5 96 aa12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 RPP25LQ8N5L8 163 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 OR4D10Q8NGI6 311 aa12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 TERB2Q8NHR7 220 aa12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 C11orf45Q8TAV5 145 aa12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 ZFAND1Q8TCF1 268 aa12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 RRNAD1Q96FB5 475 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 ABHD1Q96SE0 405 aa12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 NAA50Q9GZZ1 169 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-209ENST00000483002 MTFP1Q9UDX5 166 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms