RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 SMCO1Q147U7 214 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 ANKRD55Q3KP44 614 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 ACSM6Q6P461 480 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 REC114Q7Z4M0 266 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 ZNF114Q8NC26 417 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 OR9G4Q8NGQ1 327 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 OR52E5Q8NH55 327 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 ZNF502Q8TBZ5 544 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 VN1R17PQ8TDU5 208 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 MISP3Q96FF7 219 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 AURKAIP1Q9NWT8 199 aaPredicted RBP6.72□□□□□ -1.33
SNX4-205ENST00000482965 CACFD1Q9UGQ2 172 aa6.72□□□□□ -1.33
SNX4-205ENST00000482965 C9orf170A2RU37 121 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 INS-IGF2F8WCM5 200 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 K7EIM0 57 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 NXPH3O95157 252 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 OR2C1O95371 312 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 HLA-AP01891 365 aaKnown RBP6.71□□□□□ -1.34
SNX4-205ENST00000482965 CLEC3BP05452 202 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 ANXA7P20073 488 aaKnown RBP6.71□□□□□ -1.34
SNX4-205ENST00000482965 SUB1P53999 127 aaKnown RBP eCLIP6.71□□□□□ -1.34
SNX4-205ENST00000482965 AARDQ4LEZ3 155 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 C4orf46Q504U0 113 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 PDLIM3Q53GG5 364 aaPredicted RBP6.71□□□□□ -1.34
SNX4-205ENST00000482965 Q56UQ5 140 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 NMSQ5H8A3 153 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 PLET1Q6UQ28 207 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 LRTM2Q8N967 370 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 OR1S1Q8NH92 325 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 SCARB1Q8WTV0 552 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 PINX1Q96BK5 328 aaKnown RBP6.71□□□□□ -1.34
SNX4-205ENST00000482965 HEYLQ9NQ87 328 aaPredicted RBP6.71□□□□□ -1.34
SNX4-205ENST00000482965 ZC4H2Q9NQZ6 224 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 C21orf62Q9NYP8 219 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 PEMTQ9UBM1 199 aa6.71□□□□□ -1.34
SNX4-205ENST00000482965 A0A1B0GU03 582 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 OR2T8A6NH00 312 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 TGOLN2O43493 480 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 UPK1BO75841 260 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 LY86O95711 162 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 MT-CO2P00403 227 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 TCRBP04435 133 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 HOXB5P09067 269 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 OR4E1P0C645 316 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 RNASE2P10153 161 aaKnown RBP6.7□□□□□ -1.34
SNX4-205ENST00000482965 MFAP4P55083 255 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 DHRS2Q13268 280 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 FAM106AQ4KMX7 169 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 MZT2BQ6NZ67 158 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 LYG2Q86SG7 212 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 UBAC2Q8NBM4 344 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 COQ8AQ8NI60 647 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 MRAPQ8TCY5 172 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 C20orf85Q9H1P6 137 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 TMED3Q9Y3Q3 217 aa6.7□□□□□ -1.34
SNX4-205ENST00000482965 TRAV6A0A075B6T7 132 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 FAM240BA0A1B0GVZ2 78 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 WI2-2373I1.2A0A1W2PRP0 233 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 ZNF320A2RRD8 509 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 I3L2K1 104 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 CORTO00230 105 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 CSN3P07498 182 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 SLC25A6P12236 298 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 HTR2BP41595 481 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 TNFRSF9Q07011 255 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 ASAH1Q13510 395 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 GGNBP1Q5YKI7 109 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 SPSB3Q6PJ21 355 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 HAPLN4Q86UW8 402 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 GPHB5Q86YW7 130 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 BSCL2Q96G97 398 aaPredicted RBP6.69□□□□□ -1.34
SNX4-205ENST00000482965 PRR25Q96S07 402 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 ATP6V0BQ99437 205 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 HIPK2Q9H2X6 1198 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 RBKSQ9H477 322 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 NUDT15Q9NV35 164 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 GAR1Q9NY12 217 aaKnown RBP6.69□□□□□ -1.34
SNX4-205ENST00000482965 HSPB7Q9UBY9 170 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 TBC1D24Q9ULP9 559 aa6.69□□□□□ -1.34
SNX4-205ENST00000482965 ZNF256Q9Y2P7 627 aaPredicted RBP6.69□□□□□ -1.34
SNX4-205ENST00000482965 IGHV3-35A0A0C4DH35 117 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 K7EIL1 84 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 LGALS9O00182 355 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 NUPL2O15504 423 aaKnown RBP6.68□□□□□ -1.34
SNX4-205ENST00000482965 ADAP1O75689 374 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 IFNA21P01568 189 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 IGLV1-51P01701 117 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 IGHV3-48P01763 117 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 H2AFB2P0C5Z0 115 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 SPNP16150 400 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 NPY1RP25929 384 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 OPRK1P41145 380 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 NPBWR1P48145 328 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 BSXQ3C1V8 233 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 C2orf83Q53S99 150 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 PVRIGQ6DKI7 326 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 C11orf87Q6NUJ2 197 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 IL34Q6ZMJ4 242 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 NOXA1Q86UR1 476 aa6.68□□□□□ -1.34
SNX4-205ENST00000482965 DUSP18Q8NEJ0 188 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms