RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 DOLPP1Q86YN1 238 aa10.26□□□□□ -0.77
CCDC78-213ENST00000482878 C11orf53Q8IXP5 236 aa10.26□□□□□ -0.77
CCDC78-213ENST00000482878 OR1N2Q8NGR9 330 aa10.26□□□□□ -0.77
CCDC78-213ENST00000482878 SPRR3Q9UBC9 169 aa10.26□□□□□ -0.77
CCDC78-213ENST00000482878 METRNQ9UJH8 293 aa10.26□□□□□ -0.77
CCDC78-213ENST00000482878 TRBV9A0A0B4J1U6 114 aa10.26□□□□□ -0.77
CCDC78-213ENST00000482878 SLC35E4Q6ICL7 350 aa10.26□□□□□ -0.77
CCDC78-213ENST00000482878 NEUROG1Q92886 237 aa10.26□□□□□ -0.77
CCDC78-213ENST00000482878 FAM234AQ9H0X4 552 aa10.26□□□□□ -0.77
CCDC78-213ENST00000482878 FNDC4Q9H6D8 234 aaPredicted RBP10.26□□□□□ -0.77
CCDC78-213ENST00000482878 ZNF331Q9NQX6 463 aaPredicted RBP10.26□□□□□ -0.77
CCDC78-213ENST00000482878 DMXL2Q8TDJ6 3036 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 TRAV8-6A0A0B4J262 113 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 IQCF6A8MYZ5 107 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 TNXAQ16473 311 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 PRR31Q5SQ13 230 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 FER1L6-AS1Q8NA97 138 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 SFXN3Q9BWM7 321 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 RNASE7Q9H1E1 156 aaKnown RBP10.25□□□□□ -0.77
CCDC78-213ENST00000482878 CLEC5AQ9NY25 188 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 hDV102S1A0JD36 115 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 K7EN84 100 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 WISP2O76076 250 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 CD59P13987 128 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 USF1P22415 310 aaPredicted RBP10.25□□□□□ -0.77
CCDC78-213ENST00000482878 NPY1RP25929 384 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 UQCRFS1P47985 274 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 SELENOVP59797 346 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 RNFT1Q5M7Z0 435 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 BVES-AS1Q5T3Y7 98 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 VWA1Q6PCB0 445 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 OR13A1Q8NGR1 328 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 OR1B1Q8NGR6 318 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 KLF14Q8TD94 323 aaPredicted RBP10.25□□□□□ -0.77
CCDC78-213ENST00000482878 TMEM186Q96B77 213 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 OR8B2Q96RD0 313 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 NAA38Q9BRA0 125 aaKnown RBP10.25□□□□□ -0.77
CCDC78-213ENST00000482878 GCM1Q9NP62 436 aa10.25□□□□□ -0.77
CCDC78-213ENST00000482878 TRAV9-1A0A075B6T8 112 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 GATA2P23769 480 aaPredicted RBP10.24□□□□□ -0.77
CCDC78-213ENST00000482878 PAX2Q02962 417 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 SLC25A34Q6PIV7 304 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 C12orf54Q6X4T0 127 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 OR2T6Q8NHC8 308 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 DCTN5Q9BTE1 182 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 PEF1Q9UBV8 284 aaKnown RBP10.24□□□□□ -0.77
CCDC78-213ENST00000482878 PSG11Q9UQ72 335 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 COL27A1Q8IZC6 1860 aaPredicted RBP10.24□□□□□ -0.77
CCDC78-213ENST00000482878 OR4C46A6NHA9 309 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 BMPR1BO00238 502 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 CDX4O14627 284 aaPredicted RBP10.24□□□□□ -0.77
CCDC78-213ENST00000482878 OR9G9P0C7N8 305 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 IGHV1-2P23083 117 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 CD1BP29016 333 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 RPS20P60866 119 aaKnown RBP10.24□□□□□ -0.77
CCDC78-213ENST00000482878 MRPL27Q9P0M9 148 aaKnown RBP10.24□□□□□ -0.77
CCDC78-213ENST00000482878 MAP1AP78559 2803 aaPredicted RBP10.24□□□□□ -0.77
CCDC78-213ENST00000482878 FAM181BA6NEQ2 426 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 SNAI2O43623 268 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 GNG4P50150 75 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 EDDM3AQ14507 147 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 PRAMEF6Q5VXH4 476 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 MDS2Q8NDY4 140 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 TAAR6Q96RI8 345 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 WDR83OSQ9Y284 106 aa10.24□□□□□ -0.77
CCDC78-213ENST00000482878 KLF13Q9Y2Y9 288 aaPredicted RBP10.24□□□□□ -0.77
CCDC78-213ENST00000482878 A0A087X0K7 114 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 TMEM238LA0A1B0GVL6 79 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 LINC00869P0C866 280 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 FAM71F2Q6NXP2 309 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 EBLN2Q6P2I7 272 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 TMEM136Q6ZRR5 245 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 FOXF2Q12947 444 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 ACP7Q6ZNF0 438 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 PPIAL4DF5H284 164 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 PROP1O75360 226 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 HLA-DQA1P01909 254 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 DEFB125Q8N687 156 aa10.23□□□□□ -0.77
CCDC78-213ENST00000482878 EAF1Q96JC9 268 aaPredicted RBP10.23□□□□□ -0.77
CCDC78-213ENST00000482878 MT-CO2P00403 227 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 AMY1AP04745 511 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 PPOXP50336 477 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 RHOBP62745 196 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
CCDC78-213ENST00000482878 WDR82Q6UXN9 313 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 PQLC2Q6ZP29 291 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 FDCSPQ8NFU4 85 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 OR4P4Q8NGL7 312 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 SSMEM1Q8WWF3 244 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 CA1P00915 261 aaPredicted RBP10.22□□□□□ -0.77
CCDC78-213ENST00000482878 SMAGPQ0VAQ4 97 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 GTF2H5Q6ZYL4 71 aa10.22□□□□□ -0.77
CCDC78-213ENST00000482878 HSD17B10Q99714 261 aaKnown RBP10.22□□□□□ -0.77
CCDC78-213ENST00000482878 YTHDF2Q9Y5A9 579 aaKnown RBP10.22□□□□□ -0.77
CCDC78-213ENST00000482878 SAA2-SAA4A0A096LPE2 208 aa10.21□□□□□ -0.77
CCDC78-213ENST00000482878 C7orf71A4D174 169 aa10.21□□□□□ -0.77
CCDC78-213ENST00000482878 C21orf140B9A014 251 aa10.21□□□□□ -0.77
CCDC78-213ENST00000482878 COL8A2P25067 703 aa10.21□□□□□ -0.77
CCDC78-213ENST00000482878 GPR6P46095 362 aaPredicted RBP10.21□□□□□ -0.77
CCDC78-213ENST00000482878 TIGITQ495A1 244 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms