RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 K7EIM0 57 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 CORTO00230 105 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 HLA-AP01891 365 aaKnown RBP12.69□□□□□ -0.38
HMGN1-214ENST00000482733 OR4E1P0C645 316 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 SLC25A6P12236 298 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 KRTAP10-11P60412 298 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 MZT2BQ6NZ67 158 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 GPHB5Q86YW7 130 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 COQ8AQ8NI60 647 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 SCARB1Q8WTV0 552 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 MISP3Q96FF7 219 aa12.69□□□□□ -0.38
HMGN1-214ENST00000482733 AURKAIP1Q9NWT8 199 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-214ENST00000482733 LGALS9O00182 355 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 UPK1BO75841 260 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 OR2C1O95371 312 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 GPR183P32249 361 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 HTR2BP41595 481 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 ASAH1Q13510 395 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 FAM106AQ4KMX7 169 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 C4orf46Q504U0 113 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 PVRIGQ6DKI7 326 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 SPSB3Q6PJ21 355 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 PLET1Q6UQ28 207 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 LYG2Q86SG7 212 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 OR1S1Q8NH92 325 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 BSCL2Q96G97 398 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-214ENST00000482733 TXN2Q99757 166 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 C20orf85Q9H1P6 137 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 HIPK2Q9H2X6 1198 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 HEYLQ9NQ87 328 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-214ENST00000482733 SIGLEC8Q9NYZ4 499 aa12.68□□□□□ -0.38
HMGN1-214ENST00000482733 FAM240BA0A1B0GVZ2 78 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 I3L2K1 104 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 TGOLN2O43493 480 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 MT-CO2P00403 227 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 PRB2P02812 416 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-214ENST00000482733 TCRBP04435 133 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 RNASE2P10153 161 aaKnown RBP12.67□□□□□ -0.38
HMGN1-214ENST00000482733 ANXA7P20073 488 aaKnown RBP12.67□□□□□ -0.38
HMGN1-214ENST00000482733 FCGR2BP31994 310 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-214ENST00000482733 TNFRSF9Q07011 255 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 DHRS2Q13268 280 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 BSXQ3C1V8 233 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 NOXA1Q86UR1 476 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 HSPB7Q9UBY9 170 aa12.67□□□□□ -0.38
HMGN1-214ENST00000482733 IGHV3-21A0A0B4J1V1 117 aa12.66□□□□□ -0.38
HMGN1-214ENST00000482733 MFAP4P55083 255 aa12.66□□□□□ -0.38
HMGN1-214ENST00000482733 Q56UQ5 140 aa12.66□□□□□ -0.38
HMGN1-214ENST00000482733 PINX1Q96BK5 328 aaKnown RBP12.66□□□□□ -0.38
HMGN1-214ENST00000482733 TBC1D24Q9ULP9 559 aa12.66□□□□□ -0.38
HMGN1-214ENST00000482733 OR2T8A6NH00 312 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 FAM90A26D6RGX4 464 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 PITX3O75364 302 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 CSN3P07498 182 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 HOXB5P09067 269 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 ATP5IP56385 69 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-214ENST00000482733 IL34Q6ZMJ4 242 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 UBAC2Q8NBM4 344 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 SLC24A4Q8NFF2 622 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 PALMDQ9NP74 551 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 ZNF256Q9Y2P7 627 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-214ENST00000482733 U3KQ87 197 aa12.65□□□□□ -0.38
HMGN1-214ENST00000482733 NXPH3O95157 252 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 IFNA21P01568 189 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 IGLV1-51P01701 117 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 NPBWR1P48145 328 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 DCTN2Q13561 401 aaKnown RBP12.64□□□□□ -0.39
HMGN1-214ENST00000482733 C2orf83Q53S99 150 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 GGNBP1Q5YKI7 109 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 DUSP18Q8NEJ0 188 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 MRAPQ8TCY5 172 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 RNASEH2CQ8TDP1 164 aaKnown RBP12.64□□□□□ -0.39
HMGN1-214ENST00000482733 DTD1Q8TEA8 209 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 MITD1Q8WV92 249 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 ZNF436Q9C0F3 470 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-214ENST00000482733 RBKSQ9H477 322 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 ZC4H2Q9NQZ6 224 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 NUDT15Q9NV35 164 aa12.64□□□□□ -0.39
HMGN1-214ENST00000482733 TRAV6A0A075B6T7 132 aa12.63□□□□□ -0.39
HMGN1-214ENST00000482733 RPS10-NUDT3A0A1W2PQS6 291 aa12.63□□□□□ -0.39
HMGN1-214ENST00000482733 ZNF320A2RRD8 509 aa12.63□□□□□ -0.39
HMGN1-214ENST00000482733 A8MWP6 167 aa12.63□□□□□ -0.39
HMGN1-214ENST00000482733 F8W735 103 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-214ENST00000482733 NUPL2O15504 423 aaKnown RBP12.63□□□□□ -0.39
HMGN1-214ENST00000482733 MED6O75586 246 aa12.63□□□□□ -0.39
HMGN1-214ENST00000482733 H2AFB2P0C5Z0 115 aa12.63□□□□□ -0.39
HMGN1-214ENST00000482733 ELLP55199 621 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-214ENST00000482733 RELQ04864 619 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-214ENST00000482733 ENKURQ8TC29 256 aa12.63□□□□□ -0.39
HMGN1-214ENST00000482733 UFC1Q9Y3C8 167 aa12.63□□□□□ -0.39
HMGN1-214ENST00000482733 WI2-2373I1.2A0A1W2PRP0 233 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 C2orf70A6NJV1 201 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 K7EIL1 84 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 NDUFA4O00483 81 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 GNG7O60262 68 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 SCGB2A1O75556 95 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 LY86O95711 162 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 CTSGP08311 255 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 NPY1RP25929 384 aa12.62□□□□□ -0.39
HMGN1-214ENST00000482733 OPRK1P41145 380 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms