RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 RELQ04864 619 aaPredicted RBP11.8□□□□□ -0.52
COL16A1-212ENST00000482478 MCFD2Q8NI22 146 aa11.8□□□□□ -0.52
COL16A1-212ENST00000482478 ATP6V0BQ99437 205 aa11.8□□□□□ -0.52
COL16A1-212ENST00000482478 NAA60Q9H7X0 242 aa11.8□□□□□ -0.52
COL16A1-212ENST00000482478 MCUBQ9NWR8 336 aa11.8□□□□□ -0.52
COL16A1-212ENST00000482478 MRPL27Q9P0M9 148 aaKnown RBP11.8□□□□□ -0.52
COL16A1-212ENST00000482478 DNAH7Q8WXX0 4024 aa11.79□□□□□ -0.52
COL16A1-212ENST00000482478 TENM3Q9P273 2699 aa11.79□□□□□ -0.52
COL16A1-212ENST00000482478 F8W735 103 aaPredicted RBP11.79□□□□□ -0.52
COL16A1-212ENST00000482478 CTDSPLO15194 276 aa11.79□□□□□ -0.52
COL16A1-212ENST00000482478 GNG7O60262 68 aa11.79□□□□□ -0.52
COL16A1-212ENST00000482478 YIF1AO95070 293 aa11.79□□□□□ -0.52
COL16A1-212ENST00000482478 UCP1P25874 307 aa11.79□□□□□ -0.52
COL16A1-212ENST00000482478 SNCAP37840 140 aa11.79□□□□□ -0.52
COL16A1-212ENST00000482478 SURF2Q15527 256 aaPredicted RBP11.79□□□□□ -0.52
COL16A1-212ENST00000482478 ANKRD55Q3KP44 614 aa11.79□□□□□ -0.52
COL16A1-212ENST00000482478 FAM110AQ9BQ89 295 aa11.79□□□□□ -0.52
COL16A1-212ENST00000482478 SLIRPQ9GZT3 109 aaKnown RBP11.79□□□□□ -0.52
COL16A1-212ENST00000482478 RSL24D1Q9UHA3 163 aaKnown RBP11.79□□□□□ -0.52
COL16A1-212ENST00000482478 IGHV3-48P01763 117 aa11.78□□□□□ -0.52
COL16A1-212ENST00000482478 ADMP35318 185 aa11.78□□□□□ -0.52
COL16A1-212ENST00000482478 MFAP4P55083 255 aa11.78□□□□□ -0.52
COL16A1-212ENST00000482478 OR51S1Q8NGJ8 323 aa11.78□□□□□ -0.52
COL16A1-212ENST00000482478 CITED4Q96RK1 184 aa11.78□□□□□ -0.52
COL16A1-212ENST00000482478 SPAG8Q99932 426 aaPredicted RBP11.78□□□□□ -0.52
COL16A1-212ENST00000482478 TMEM222Q9H0R3 208 aa11.78□□□□□ -0.52
COL16A1-212ENST00000482478 C5orf66Q9H5L9 145 aa11.78□□□□□ -0.52
COL16A1-212ENST00000482478 TRAV25A0A0B4J276 109 aa11.77□□□□□ -0.53
COL16A1-212ENST00000482478 A0A0B4J293 547 aa11.77□□□□□ -0.53
COL16A1-212ENST00000482478 A0A0G2JRQ6 117 aa11.77□□□□□ -0.53
COL16A1-212ENST00000482478 I3L2K1 104 aa11.77□□□□□ -0.53
COL16A1-212ENST00000482478 P0C879 139 aa11.77□□□□□ -0.53
COL16A1-212ENST00000482478 TMEM268Q5VZI3 342 aa11.77□□□□□ -0.53
COL16A1-212ENST00000482478 LAMTOR1Q6IAA8 161 aa11.77□□□□□ -0.53
COL16A1-212ENST00000482478 RBPMSQ93062 196 aaKnown RBP11.77□□□□□ -0.53
COL16A1-212ENST00000482478 SCP2D1Q9UJQ7 156 aa11.77□□□□□ -0.53
COL16A1-212ENST00000482478 ANKRD20A5PA0PJZ0 165 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 FABP12A6NFH5 140 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 CRYM-AS1A6NIL9 109 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 CORTO00230 105 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 GSTZ1O43708 216 aaPredicted RBP11.76□□□□□ -0.53
COL16A1-212ENST00000482478 SCGB2A1O75556 95 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 C8orf88P0DMB2 117 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 LYL1P12980 280 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 OPRK1P41145 380 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 ETV6P41212 452 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 SUB1P53999 127 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL16A1-212ENST00000482478 FAM219AQ8IW50 185 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 CACNG5Q9UF02 275 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 UBQLN2Q9UHD9 624 aa11.76□□□□□ -0.53
COL16A1-212ENST00000482478 IGHV3-49A0A0A0MS15 119 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 RBMY1BA6NDE4 496 aaKnown RBP11.75□□□□□ -0.53
COL16A1-212ENST00000482478 RBMY1EA6NEQ0 496 aaKnown RBP11.75□□□□□ -0.53
COL16A1-212ENST00000482478 C15orf62A8K5M9 175 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 NXPH3O95157 252 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 RBMY1DP0C7P1 496 aaKnown RBP11.75□□□□□ -0.53
COL16A1-212ENST00000482478 FAUP35544 74 aaKnown RBP11.75□□□□□ -0.53
COL16A1-212ENST00000482478 NPBWR1P48145 328 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 DHODHQ02127 395 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 PYDC2Q56P42 97 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 ZFAND6Q6FIF0 208 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 DUSP18Q8NEJ0 188 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 LHFPL5Q8TAF8 219 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 TXN2Q99757 166 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 RTBDNQ9BSG5 229 aaPredicted RBP11.75□□□□□ -0.53
COL16A1-212ENST00000482478 GGTLC1Q9BX51 225 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 RYR3Q15413 4870 aa11.75□□□□□ -0.53
COL16A1-212ENST00000482478 OR4C46A6NHA9 309 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 TSPAN4O14817 238 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 CTSGP08311 255 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 FCGR2BP31994 310 aaPredicted RBP11.74□□□□□ -0.53
COL16A1-212ENST00000482478 TNFSF8P32971 234 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 S100A5P33763 92 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 BMI1P35226 326 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 CASC10Q5T4H9 136 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 SCGB3A2Q96PL1 93 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 NXF2Q9GZY0 626 aaKnown RBP11.74□□□□□ -0.53
COL16A1-212ENST00000482478 HIPK2Q9H2X6 1198 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 EDA2RQ9HAV5 297 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 PRR13Q9NZ81 148 aa11.74□□□□□ -0.53
COL16A1-212ENST00000482478 LOC102724200A0A096LPH7 203 aaPredicted RBP11.73□□□□□ -0.53
COL16A1-212ENST00000482478 IGHV7-4-1A0A0J9YVY3 117 aa11.73□□□□□ -0.53
COL16A1-212ENST00000482478 CEBPZOSA8MTT3 80 aa11.73□□□□□ -0.53
COL16A1-212ENST00000482478 INS-IGF2F8WCM5 200 aa11.73□□□□□ -0.53
COL16A1-212ENST00000482478 CDS2O95674 445 aa11.73□□□□□ -0.53
COL16A1-212ENST00000482478 RNASE2P10153 161 aaKnown RBP11.73□□□□□ -0.53
COL16A1-212ENST00000482478 AP3S2P59780 193 aa11.73□□□□□ -0.53
COL16A1-212ENST00000482478 SELENOHQ8IZQ5 122 aaKnown RBP11.73□□□□□ -0.53
COL16A1-212ENST00000482478 TMEM116Q8NCL8 245 aa11.73□□□□□ -0.53
COL16A1-212ENST00000482478 GPR132Q9UNW8 380 aa11.73□□□□□ -0.53
COL16A1-212ENST00000482478 STARD9Q9P2P6 4700 aa11.72□□□□□ -0.53
COL16A1-212ENST00000482478 IGKV3-7A0A075B6H7 116 aa11.72□□□□□ -0.53
COL16A1-212ENST00000482478 IGHV3OR16-13A0A075B7E8 117 aa11.72□□□□□ -0.53
COL16A1-212ENST00000482478 IGHV3-74A0A0B4J1X5 117 aa11.72□□□□□ -0.53
COL16A1-212ENST00000482478 K7EMT4 169 aa11.72□□□□□ -0.53
COL16A1-212ENST00000482478 ANXA3P12429 323 aa11.72□□□□□ -0.53
COL16A1-212ENST00000482478 AKR1C4P17516 323 aa11.72□□□□□ -0.53
COL16A1-212ENST00000482478 TFPI2P48307 235 aa11.72□□□□□ -0.53
COL16A1-212ENST00000482478 SPCS3P61009 180 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms