RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ARAP3Q8WWN8 1544 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.97□□□□□ -1.93
VPS41-212ENST00000482217 TRAPPC8Q9Y2L5 1435 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 IGKV1-12A0A0C4DH73 117 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 A0A0G2JMM0 328 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 A0A1W2PPB8 328 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 ARRDC5A6NEK1 342 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 TLCD2A6NGC4 264 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 ZNF860A6NHJ4 632 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 ZNF727A8MUV8 499 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 KIR3DP1A8MWS1 328 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 IGLL5B9A064 214 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 TAX1BP3O14907 124 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 LTAP01374 205 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 IGKV1-5P01602 117 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 IGKV1D-12P01611 117 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 CTSDP07339 412 aaPredicted RBP2.97□□□□□ -1.93
VPS41-212ENST00000482217 CXCL1P09341 107 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 SCGB1C2P0DMR2 95 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 ZNF823P16415 610 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 COX7A1P24310 79 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 LMO2P25791 158 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 CRYBB3P26998 211 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 TMBIM6P55061 237 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 AQP4P55087 323 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 TGIF1Q15583 401 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 PRR4Q16378 134 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 RSPO1Q2MKA7 263 aaPredicted RBP2.97□□□□□ -1.93
VPS41-212ENST00000482217 ZC2HC1BQ5TFG8 222 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 LAIR2Q6ISS4 152 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 ZNF497Q6ZNH5 498 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 LCA10Q71F78 164 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 MDP1Q86V88 176 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 GPHB5Q86YW7 130 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 WFDC11Q8NEX6 87 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 FAM57AQ8TBR7 257 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 SCGB1C1Q8TD33 95 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 RTN4IP1Q8WWV3 396 aaPredicted RBP2.97□□□□□ -1.93
VPS41-212ENST00000482217 TMEM158Q8WZ71 300 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 H1FXQ92522 213 aaKnown RBP2.97□□□□□ -1.93
VPS41-212ENST00000482217 FAM104AQ969W3 186 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 TOMM6Q96B49 74 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 LINC00479Q96M42 142 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 FGFBP2Q9BYJ0 223 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 IMUPQ9GZP8 106 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 TCEAL2Q9H3H9 227 aaPredicted RBP2.97□□□□□ -1.93
VPS41-212ENST00000482217 BANF2Q9H503 90 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 MRPS16Q9Y3D3 137 aaKnown RBP2.97□□□□□ -1.93
VPS41-212ENST00000482217 TOPBP1Q92547 1522 aa2.97□□□□□ -1.93
VPS41-212ENST00000482217 A2ML1A8K2U0 1454 aa2.96□□□□□ -1.93
VPS41-212ENST00000482217 DSPPQ9NZW4 1301 aa2.96□□□□□ -1.93
VPS41-212ENST00000482217 ZFC3H1O60293 1989 aaKnown RBP2.96□□□□□ -1.94
VPS41-212ENST00000482217 TDRD6O60522 2096 aaKnown RBP2.96□□□□□ -1.94
VPS41-212ENST00000482217 TROQ12816 1431 aaPredicted RBP2.96□□□□□ -1.94
VPS41-212ENST00000482217 FMN1Q68DA7 1419 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 IGLV4-3A0A075B6K6 122 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 A0A087X0T9 212 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 A0A0J9YW62 118 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 BBIP1A8MTZ0 92 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 PEX7O00628 323 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 PLA2G10O15496 165 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 NAPSAO96009 420 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 IGKV1-39P01597 117 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 BGLAPP02818 100 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 IGKV1D-39P04432 117 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 HLA-DPB1P04440 258 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 SPINK8P0C7L1 97 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 SEC11BP0C7V7 166 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 ZNF19P17023 458 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 PSMB8P28062 276 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 GUCA1AP43080 201 aaPredicted RBP2.96□□□□□ -1.94
VPS41-212ENST00000482217 CA7P43166 264 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 TPPP2P59282 170 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 PLGLB1Q02325 96 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 HES1Q14469 280 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 RRN3P1Q2M238 152 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 ORMDL2Q53FV1 153 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 SLC25A34Q6PIV7 304 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 SSX8Q7RTT4 187 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 OR1J4Q8NGS1 313 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 RPS4Y2Q8TD47 263 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 MAL2Q969L2 176 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 LINC00052Q96N35 136 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 TIMM17AQ99595 171 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 Q9H3A6 140 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 C16orf95Q9H693 158 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 RNF122Q9H9V4 155 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 COMMD3Q9UBI1 195 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 FUT9Q9Y231 359 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 TEX14Q8IWB6 1497 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 KIF20BQ96Q89 1820 aa2.96□□□□□ -1.94
VPS41-212ENST00000482217 CEP170Q5SW79 1584 aa2.95□□□□□ -1.94
VPS41-212ENST00000482217 BAZ1AQ9NRL2 1556 aaPredicted RBP2.95□□□□□ -1.94
VPS41-212ENST00000482217 IGKV1-6A0A0C4DH72 117 aa2.95□□□□□ -1.94
VPS41-212ENST00000482217 A0A0D9SEW6 157 aa2.95□□□□□ -1.94
VPS41-212ENST00000482217 TRBV7-6A0A0J9YX20 115 aa2.95□□□□□ -1.94
VPS41-212ENST00000482217 BUB1B-PAK6H3BSN5 160 aa2.95□□□□□ -1.94
VPS41-212ENST00000482217 TMEM256-PLSCR3K7ERE1 68 aa2.95□□□□□ -1.94
VPS41-212ENST00000482217 CDC42EP2O14613 210 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms