RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 REG1AP05451 166 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 OCM2P0CE71 109 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 OCMP0CE72 109 aaPredicted RBP2.89□□□□□ -1.95
VPS50-214ENST00000477935 RRASP10301 218 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 ANXA3P12429 323 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 MAPK3P27361 379 aaPredicted RBP2.89□□□□□ -1.95
VPS50-214ENST00000477935 PSMB6P28072 239 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 NUDT2P50583 147 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 KRTAP10-1P60331 282 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 OXA1LQ15070 435 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 USF2Q15853 346 aaPredicted RBP2.89□□□□□ -1.95
VPS50-214ENST00000477935 FAM74A3Q4VXF1 159 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 OR2B11Q5JQS5 317 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 BCL2L15Q5TBC7 163 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 ELP2Q6IA86 826 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 APRG1Q8IVJ8 170 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 LINC01561Q8N1V8 128 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 MRPS24Q96EL2 167 aaKnown RBP2.89□□□□□ -1.95
VPS50-214ENST00000477935 MRPL20Q9BYC9 149 aaKnown RBP2.89□□□□□ -1.95
VPS50-214ENST00000477935 YIPF3Q9GZM5 350 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 SLC2A9Q9NRM0 540 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 TMEM14BQ9NUH8 114 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 PIPOXQ9P0Z9 390 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 OR52A1Q9UKL2 312 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 TBC1D24Q9ULP9 559 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 ING4Q9UNL4 249 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 WASHC3Q9Y3C0 194 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 TNXBP22105 4242 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 IGHV3-43A0A0B4J1X8 118 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 IGKV1-12A0A0C4DH73 117 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 PPP5D1E7EU14 171 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 E9PLD3 99 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 RAB29O14966 203 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 CCDC22O60826 627 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 IGKV1D-12P01611 117 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 HLA-AP01891 365 aaKnown RBP2.88□□□□□ -1.95
VPS50-214ENST00000477935 MT-ND4P03905 459 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 CD5P06127 495 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 IGHV3-43DP0DP04 118 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 MAGEA2P43356 314 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 PAFAH1B2P68402 229 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 WHAMMP3Q1A5X7 153 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 MORN2Q502X0 79 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 C6orf183Q5T699 404 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 RASSF6Q6ZTQ3 369 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
VPS50-214ENST00000477935 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 UTS2BQ765I0 119 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 HSD17B13Q7Z5P4 300 aaPredicted RBP2.88□□□□□ -1.95
VPS50-214ENST00000477935 STX19Q8N4C7 294 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 PLPPR1Q8TBJ4 325 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 TMEM80Q96HE8 168 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 OPALINQ96PE5 141 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 IL4I1Q96RQ9 567 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 PHB2Q99623 299 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 SCRT1Q9BWW7 348 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 TSSK6Q9BXA6 273 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 OR51V1Q9H2C8 321 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 OR2S2Q9NQN1 319 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 CMC2Q9NRP2 79 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 LRRC42Q9Y546 428 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 R4GMQ9 66 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 DNAH8Q96JB1 4490 aa2.88□□□□□ -1.95
VPS50-214ENST00000477935 TRAV39A0A0B4J263 110 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 H0YJW9 148 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 YPEL1O60688 119 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 S1PR2O95136 353 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 GADD45GO95257 159 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 SOX14O95416 240 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 HBZP02008 142 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 C1QBP02746 253 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 SEMG1P04279 462 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 CT45A6P0DMU7 189 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 CT45A5P0DMU8 189 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 CT45A7P0DMV0 189 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 ATF1P18846 271 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 GNRHRP30968 328 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 HTD2P86397 168 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 LIPEQ05469 1076 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 IFFO1Q0D2I5 559 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 LINC01620Q4KN68 170 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 COQ5Q5HYK3 327 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 TTC9CQ8N5M4 171 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 SUMF2Q8NBJ7 301 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 GIMAP1Q8WWP7 306 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 YPEL2Q96QA6 119 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 SPIN2AQ99865 258 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 SPIN2BQ9BPZ2 258 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 PAIP2Q9BPZ3 127 aaKnown RBP2.87□□□□□ -1.95
VPS50-214ENST00000477935 NIPSNAP3BQ9BS92 247 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 DAZ1Q9NQZ3 744 aaKnown RBP2.87□□□□□ -1.95
VPS50-214ENST00000477935 PAK1IP1Q9NWT1 392 aaPredicted RBP2.87□□□□□ -1.95
VPS50-214ENST00000477935 JPT1Q9UK76 154 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 IKZF2Q9UKS7 526 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 SAMD4AQ9UPU9 718 aaKnown RBP2.87□□□□□ -1.95
VPS50-214ENST00000477935 ST3GAL6Q9Y274 331 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 GMPPBQ9Y5P6 360 aa2.87□□□□□ -1.95
VPS50-214ENST00000477935 PUS1Q9Y606 427 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS50-214ENST00000477935 TRBV7-1A0A0A6YYK4 115 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 IGKV1-9A0A0C4DH69 117 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms