RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CD36P16671 472 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 CALB2P22676 271 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 GNRHRP30968 328 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 DAD1P61803 113 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 BAK1Q16611 211 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 HSP90B2PQ58FF3 399 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 HSD17B13Q7Z5P4 300 aaPredicted RBP5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 STXBP6Q8NFX7 210 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 MAFIPQ8WZ33 124 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 Q96MT0 163 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 HSD17B10Q99714 261 aaKnown RBP5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 TXN2Q99757 166 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 GINS3Q9BRX5 216 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 HRASLSQ9HDD0 168 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 CLEC2DQ9UHP7 191 aa5.06□□□□□ -1.6
SPTLC1-205ENST00000477888 IGHV3OR16-12A0A075B7B8 117 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 IGKV1D-13A0A0B4J2D9 117 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 TEX50A0A1B0GTY4 177 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 I3L2K1 104 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 SLC22A5O76082 557 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 OXTP01178 125 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 ALPLP05186 524 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 TRAPPC2P0DI81 140 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 TRAPPC2BP0DI82 140 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 IGKV1-13P0DP09 117 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 GCSHP23434 173 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 LINC00315P59091 139 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 RPP30P78346 268 aaKnown RBP5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 POU2AF1Q16633 256 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 ZIK1Q3SY52 487 aaPredicted RBP5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 PSMG4Q5JS54 123 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 RBM48Q5RL73 367 aaKnown RBP5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 LCE2CQ5TA81 110 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 OGFRL1Q5TC84 451 aaPredicted RBP5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 THOC7Q6I9Y2 204 aaKnown RBP5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 Q6ZS49 121 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 TCTEX1D2Q8WW35 142 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 APH1BQ8WW43 257 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 UPK3BQ9BT76 320 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 DCSTAMPQ9H295 470 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 SLC25A32Q9H2D1 315 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 NDUFA4L2Q9NRX3 87 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 SPATA2Q9UM82 520 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 SLC45A2Q9UMX9 530 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 OR2W1Q9Y3N9 320 aa5.05□□□□□ -1.6
SPTLC1-205ENST00000477888 A0A1B0GU03 582 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 RGS10O43665 173 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 MFAP4P55083 255 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 INSL4Q14641 139 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 RCN1Q15293 331 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 PHYHIPQ92561 330 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 SLC25A46Q96AG3 418 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 CENPNQ96H22 339 aaPredicted RBP5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 GPHA2Q96T91 129 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 AIFM2Q9BRQ8 373 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 TMEM231Q9H6L2 316 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 ZNF586Q9NXT0 402 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 TAS2R8Q9NYW2 309 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 AP4S1Q9Y587 144 aa5.04□□□□□ -1.6
SPTLC1-205ENST00000477888 A0A087WTM6 91 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 PNMA8CA0A1B0GUJ8 204 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 A0A1W2PS18 150 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 HELTA6NFD8 242 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 F5H768 121 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 RBFOX2O43251 390 aaKnown RBP eCLIP5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 IGHV3-48P01763 117 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 HBE1P02100 147 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 PLA2G1BP04054 148 aaKnown RBP5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 P0C879 139 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 HLA-DRB4P13762 266 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 NFYAP23511 347 aaPredicted RBP5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 NPPCP23582 126 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 CRYBB3P26998 211 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 MAPK3P27361 379 aaPredicted RBP5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 P2RY1P47900 373 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 TAS2R31P59538 309 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 ERVFC1-1P60608 527 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 RAP2BP61225 183 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 MRPS15P82914 257 aaKnown RBP5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 CLINT1Q14677 625 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 P2RY14Q15391 338 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 SMN1Q16637 294 aaKnown RBP5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 RNASE12Q5GAN4 147 aaKnown RBP5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 TMEM69Q5SWH9 247 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 C1orf158Q8N1D5 194 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 OR56B1Q8NGI3 324 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 OR1L8Q8NGR8 309 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 OR1P1Q8NH06 330 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 LSM10Q969L4 123 aaKnown RBP5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 UHRF2Q96PU4 802 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 TMEM70Q9BUB7 260 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 DIMT1Q9UNQ2 313 aaKnown RBP5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 HLA-DRB4X5D2U9 266 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 FAT3Q8TDW7 4589 aa5.03□□□□□ -1.6
SPTLC1-205ENST00000477888 GNG7O60262 68 aa5.02□□□□□ -1.61
SPTLC1-205ENST00000477888 WBP4O75554 376 aaKnown RBP5.02□□□□□ -1.61
SPTLC1-205ENST00000477888 MT-CO2P00403 227 aa5.02□□□□□ -1.61
SPTLC1-205ENST00000477888 HPRT1P00492 218 aa5.02□□□□□ -1.61
SPTLC1-205ENST00000477888 DNAH10OSP0CZ25 163 aa5.02□□□□□ -1.61
SPTLC1-205ENST00000477888 FCGR1AP12314 374 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms