RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ATP5IP56385 69 aaPredicted RBP13.42□□□□□ -0.26
EPHB4-204ENST00000477446 PMS2P11Q13670 270 aa13.42□□□□□ -0.26
EPHB4-204ENST00000477446 RITA1Q96K30 269 aa13.42□□□□□ -0.26
EPHB4-204ENST00000477446 RHOVQ96L33 236 aa13.42□□□□□ -0.26
EPHB4-204ENST00000477446 SLC35D1Q9NTN3 355 aa13.42□□□□□ -0.26
EPHB4-204ENST00000477446 FOXA2Q9Y261 457 aaPredicted RBP13.42□□□□□ -0.26
EPHB4-204ENST00000477446 C15orf61A6NNL5 157 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 C9JQL5 133 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 C17orf112F2Z3M2 114 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 TSPAN4O14817 238 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 IGKV1-16P04430 117 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 VDAC2P45880 294 aaPredicted RBP13.41□□□□□ -0.26
EPHB4-204ENST00000477446 HSPE1P61604 102 aaKnown RBP13.41□□□□□ -0.26
EPHB4-204ENST00000477446 RAB11AP62491 216 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 SSX9Q7RTT3 188 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 Q8N6K4 173 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 CLRN3Q8NCR9 226 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 RBM14Q96PK6 669 aaKnown RBP13.41□□□□□ -0.26
EPHB4-204ENST00000477446 RSG1Q9BU20 258 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 RPRMQ9NS64 109 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 FKBP11Q9NYL4 201 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 PRNDQ9UKY0 176 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 RFNGQ9Y644 331 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 UBE2L5PA0A1B0GUS4 154 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 MPDU1O75352 247 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 HSPB1P04792 205 aaKnown RBP13.41□□□□□ -0.26
EPHB4-204ENST00000477446 IL6RP08887 468 aaPredicted RBP13.41□□□□□ -0.26
EPHB4-204ENST00000477446 KHDC3LQ587J8 217 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 ZNF506Q5JVG8 444 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 PDPNQ86YL7 162 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 ZNF709Q8N972 641 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 OSR1Q8TAX0 266 aaPredicted RBP13.41□□□□□ -0.26
EPHB4-204ENST00000477446 SLC25A33Q9BSK2 321 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 HEYLQ9NQ87 328 aaPredicted RBP13.41□□□□□ -0.26
EPHB4-204ENST00000477446 ZNF257Q9Y2Q1 563 aa13.41□□□□□ -0.26
EPHB4-204ENST00000477446 FAM181BA6NEQ2 426 aa13.4□□□□□ -0.26
EPHB4-204ENST00000477446 C15orf62A8K5M9 175 aa13.4□□□□□ -0.26
EPHB4-204ENST00000477446 OR2B8PP59922 312 aa13.4□□□□□ -0.26
EPHB4-204ENST00000477446 OR4A47Q6IF82 309 aa13.4□□□□□ -0.26
EPHB4-204ENST00000477446 ENY2Q9NPA8 101 aa13.4□□□□□ -0.26
EPHB4-204ENST00000477446 TMEM14BQ9NUH8 114 aa13.4□□□□□ -0.26
EPHB4-204ENST00000477446 IFNA10P01566 189 aa13.39□□□□□ -0.27
EPHB4-204ENST00000477446 MDKP21741 143 aaPredicted RBP13.39□□□□□ -0.27
EPHB4-204ENST00000477446 FGF7P21781 194 aa13.39□□□□□ -0.27
EPHB4-204ENST00000477446 CNTFRP26992 372 aa13.39□□□□□ -0.27
EPHB4-204ENST00000477446 C16orf82Q7Z2V1 217 aa13.39□□□□□ -0.27
EPHB4-204ENST00000477446 OR10G4Q8NGN3 311 aa13.39□□□□□ -0.27
EPHB4-204ENST00000477446 OR4C13Q8NGP0 309 aa13.39□□□□□ -0.27
EPHB4-204ENST00000477446 FLYWCH2Q96CP2 140 aaKnown RBP13.39□□□□□ -0.27
EPHB4-204ENST00000477446 BET1LQ9NYM9 111 aa13.39□□□□□ -0.27
EPHB4-204ENST00000477446 NDUFS6O75380 124 aaKnown RBP13.38□□□□□ -0.27
EPHB4-204ENST00000477446 TAGLN2P37802 199 aaKnown RBP13.38□□□□□ -0.27
EPHB4-204ENST00000477446 RPS16P62249 146 aaKnown RBP13.38□□□□□ -0.27
EPHB4-204ENST00000477446 CCL20P78556 96 aa13.38□□□□□ -0.27
EPHB4-204ENST00000477446 DLK1P80370 383 aa13.38□□□□□ -0.27
EPHB4-204ENST00000477446 SOHLH1Q5JUK2 328 aa13.38□□□□□ -0.27
EPHB4-204ENST00000477446 FAM74A7A6NL05 159 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 NCBP2LA6PVI3 153 aaKnown RBP13.37□□□□□ -0.27
EPHB4-204ENST00000477446 UPK2O00526 184 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 IFNA1P01562 189 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 AMY1AP04745 511 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 NPBWR1P48145 328 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
EPHB4-204ENST00000477446 MMDQ15546 238 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 FAM74A3Q4VXF1 159 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 TMEM177Q53S58 311 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 ETV3LQ6ZN32 361 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 VKORC1L1Q8N0U8 176 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 RNF5Q99942 180 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 SLC39A9Q9NUM3 307 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 WDR83OSQ9Y284 106 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 MOB4Q9Y3A3 225 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 FNDC10F2Z333 226 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 RPL15P61313 204 aaKnown RBP13.37□□□□□ -0.27
EPHB4-204ENST00000477446 C5orf56Q8N8D9 126 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 Q8N9W7 124 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 NPBQ8NG41 125 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 OR4A5Q8NH83 315 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 RCC1LQ96I51 464 aaKnown RBP13.37□□□□□ -0.27
EPHB4-204ENST00000477446 P2RX4Q99571 388 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 ACTR3CQ9C0K3 210 aaPredicted RBP13.37□□□□□ -0.27
EPHB4-204ENST00000477446 SMCO4Q9NRQ5 59 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 C1RLQ9NZP8 487 aa13.37□□□□□ -0.27
EPHB4-204ENST00000477446 C2CD3Q4AC94 2353 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 TRAV3A0A0B4J244 114 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 CTXND1A0A1B0GTU2 59 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 A0A1B0GV50 99 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 SRRM4A7MD48 611 aaKnown RBP13.36□□□□□ -0.27
EPHB4-204ENST00000477446 NBR2O15453 112 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 NUPL2O15504 423 aaKnown RBP13.36□□□□□ -0.27
EPHB4-204ENST00000477446 CYB5BO43169 146 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 KBTBD11O94819 623 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 CRYBA1P05813 215 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 SRP19P09132 144 aaKnown RBP13.36□□□□□ -0.27
EPHB4-204ENST00000477446 BLCAPP62952 87 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 OR5B3Q8NH48 314 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 VSTM2AQ8TAG5 236 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 HARBI1Q96MB7 349 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 RARRES2Q99969 163 aa13.36□□□□□ -0.27
EPHB4-204ENST00000477446 NPCDR1Q9BY65 106 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms