RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CDK2AP2O75956 126 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 MT-CO2P00403 227 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 ZNF688P0C7X2 276 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 GNRHRP30968 328 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 G6PCP35575 357 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 CMC4P56277 68 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-204ENST00000477429 FXYD4P59646 89 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 OGFRL1Q5TC84 451 aaPredicted RBP6.95□□□□□ -1.3
COL4A5-204ENST00000477429 UBE2UQ5VVX9 321 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 STHQ8IWL8 128 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 DMBX1Q8NFW5 382 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 OR1L8Q8NGR8 309 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 FCAMRQ8WWV6 532 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 LSM10Q969L4 123 aaKnown RBP6.95□□□□□ -1.3
COL4A5-204ENST00000477429 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 ATP6V0BQ99437 205 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 NDUFAF3Q9BU61 184 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 PLEKHA2Q9HB19 425 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 TBC1D24Q9ULP9 559 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 OR51B2Q9Y5P1 312 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 METTL21EPA6NDL7 271 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 MARCH11A6NNE9 402 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 C16orf90A8MZG2 172 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 DNASE2O00115 360 aaPredicted RBP6.94□□□□□ -1.3
COL4A5-204ENST00000477429 KRASP01116 189 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 RAB3BP20337 219 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 LPAR6P43657 344 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 PPP5CP53041 499 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 DEFB1P60022 68 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 RCN1Q15293 331 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 ACTL10Q5JWF8 245 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 AADACL3Q5VUY0 350 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 C22orf42Q6IC83 251 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 GSG1LQ6UXU4 331 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 TMEM17Q86X19 198 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 BEST4Q8NFU0 473 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 DCANP1Q8TF63 244 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 ACOT13Q9NPJ3 140 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 RABAC1Q9UI14 185 aa6.94□□□□□ -1.3
COL4A5-204ENST00000477429 MEIS3P1A6NDR6 274 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 PGLYRP1O75594 196 aaPredicted RBP6.93□□□□□ -1.3
COL4A5-204ENST00000477429 IGKV1-39P01597 117 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 IGKV1D-39P04432 117 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 RLN1P04808 185 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 FGF2P09038 288 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 PSMA1P25786 263 aaKnown RBP6.93□□□□□ -1.3
COL4A5-204ENST00000477429 MFAP4P55083 255 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 GNG2P59768 71 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 RPL11P62913 178 aaKnown RBP6.93□□□□□ -1.3
COL4A5-204ENST00000477429 RELQ04864 619 aaPredicted RBP6.93□□□□□ -1.3
COL4A5-204ENST00000477429 TRAM1Q15629 374 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 MSMO1Q15800 293 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 MLANAQ16655 118 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 IZUMO4Q1ZYL8 232 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 SPINK9Q5DT21 86 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 HOGA1Q86XE5 327 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 STXBP6Q8NFX7 210 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 OR5H6Q8NGV6 325 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 OR1P1Q8NH06 330 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 SLC25A38Q96DW6 304 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 CMTM3Q96MX0 182 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 SCRT2Q9NQ03 307 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 TMEM14BQ9NUH8 114 aa6.93□□□□□ -1.3
COL4A5-204ENST00000477429 PUS1Q9Y606 427 aaKnown RBP eCLIP6.93□□□□□ -1.3
COL4A5-204ENST00000477429 TRAV2A0A0B4J234 112 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 PDCD5O14737 125 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 CASQ2O14958 399 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-204ENST00000477429 IFNA10P01566 189 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 CLEC2LP0C7M8 214 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 SCAND1P57086 179 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-204ENST00000477429 C1orf134Q5TEV5 83 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 MORN3Q6PF18 240 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-204ENST00000477429 C10orf67Q8IYJ2 551 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 ZBTB34Q8NCN2 500 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 LGALS14Q8TCE9 139 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 PINX1Q96BK5 328 aaKnown RBP6.92□□□□□ -1.3
COL4A5-204ENST00000477429 RAB40CQ96S21 281 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 CENPOQ9BU64 300 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 CCDC90BQ9GZT6 254 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 COMMD9Q9P000 198 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 XCL2Q9UBD3 114 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 U3KQE9 123 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 FAT1Q14517 4588 aa6.92□□□□□ -1.3
COL4A5-204ENST00000477429 TRAV18A0A075B6X5 111 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 TRDV1A0A1B0GX56 115 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 RGS10O43665 173 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 GNG7O60262 68 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 SPP1P10451 314 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 EMP1P54849 157 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 ARPC4P59998 168 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 PAFAH1B2P68402 229 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 THOC7Q6I9Y2 204 aaKnown RBP6.91□□□□□ -1.3
COL4A5-204ENST00000477429 HSD17B13Q7Z5P4 300 aaPredicted RBP6.91□□□□□ -1.3
COL4A5-204ENST00000477429 DUSP18Q8NEJ0 188 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 NRG4Q8WWG1 115 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 AIFM2Q9BRQ8 373 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 C8orf4Q9NR00 106 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 NDUFB11Q9NX14 153 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms