RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 PVRIGQ6DKI7 326 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 C12orf45Q8N5I9 185 aaPredicted RBP9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 OR2C3Q8N628 320 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 OR10W1Q8NGF6 305 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 OR52B4Q8NGK2 314 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 OR2K2Q8NGT1 345 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 GPR146Q96CH1 333 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 ANKRD34BA5PLL1 514 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 BMPR1BO00238 502 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 NDUFB8O95169 186 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 IGLV1-51P01701 117 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 PRH1P02810 166 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 SPSB3Q6PJ21 355 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 Q6ZRM9 215 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 TXN2Q99757 166 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 PDCD10Q9BUL8 212 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 PLEKHA3Q9HB20 300 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 PRR13Q9NZ81 148 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 NSG2Q9Y328 171 aa9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 PRKDCP78527 4128 aaKnown RBP9.46□□□□□ -0.9
CLCNKA-205ENST00000477360 A8MWP6 167 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 CORTO00230 105 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 PITX3O75364 302 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 SAP30O75446 220 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 IFNA21P01568 189 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 SULT1A3P0DMM9 295 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 SULT1A4P0DMN0 295 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 SUB1P53999 127 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 ELLP55199 621 aaPredicted RBP9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 ATP5IP56385 69 aaPredicted RBP9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 SPCS3P61009 180 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 SMCO1Q147U7 214 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 FAM106AQ4KMX7 169 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 GGNBP1Q5YKI7 109 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 RNASE11Q8TAA1 199 aaKnown RBP9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 ZNF502Q8TBZ5 544 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 BSCL2Q96G97 398 aaPredicted RBP9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 CCDC140Q96MF4 163 aa9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 ZNF256Q9Y2P7 627 aaPredicted RBP9.45□□□□□ -0.9
CLCNKA-205ENST00000477360 FAM90A26D6RGX4 464 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 ST8SIA3O43173 380 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 ADAP1O75689 374 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 TRBV12-3P01733 135 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 REG1AP05451 166 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 ARL3P36405 182 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 SNCAP37840 140 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 SYNJ2BPP57105 145 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 IZUMO4Q1ZYL8 232 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 SLC25A24Q6NUK1 477 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 IL34Q6ZMJ4 242 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 MARC2Q969Z3 335 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 HINT2Q9BX68 163 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 CACNG5Q9UF02 275 aa9.44□□□□□ -0.9
CLCNKA-205ENST00000477360 K7EIL1 84 aa9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 IFNA17P01571 189 aa9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 CLEC3BP05452 202 aa9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 HOXB5P09067 269 aa9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 BSXQ3C1V8 233 aa9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 NOXA1Q86UR1 476 aa9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 C21orf62Q9NYP8 219 aa9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 TECRQ9NZ01 308 aaKnown RBP9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 HSPB7Q9UBY9 170 aa9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 ALG5Q9Y673 324 aa9.43□□□□□ -0.9
CLCNKA-205ENST00000477360 WI2-2373I1.2A0A1W2PRP0 233 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 MFSD2BA6NFX1 497 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 K7EIM0 57 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 TGOLN2O43493 480 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 LY86O95711 162 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 CSN3P07498 182 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 HTR2BP41595 481 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 MFAP2P55001 183 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 CLEC19AQ6UXS0 136 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 C19orf35Q6ZS72 473 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 OR4D5Q8NGN0 318 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 SCARB1Q8WTV0 552 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 ZNF436Q9C0F3 470 aaPredicted RBP9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 ENY2Q9NPA8 101 aa9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 LSM4Q9Y4Z0 139 aaKnown RBP9.42□□□□□ -0.9
CLCNKA-205ENST00000477360 MPTX1A8MV57 137 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 I3L2K1 104 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 MFAP4P55083 255 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 DEFA5Q01523 94 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 ID3Q02535 119 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 TNFRSF9Q07011 255 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 IL15RAQ13261 267 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 LCN12Q6JVE5 192 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 Q6ZNX1 250 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 ZBTB8BQ8NAP8 495 aaPredicted RBP9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 OR1S1Q8NH92 325 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 OR10C1Q96KK4 312 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 C2orf50Q96LR7 162 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 UFC1Q9Y3C8 167 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 TGP01266 2768 aa9.41□□□□□ -0.9
CLCNKA-205ENST00000477360 SORL1Q92673 2214 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 PPP5D1E7EU14 171 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 K7EMT4 169 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 NDUFA4O00483 81 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 SSNA1O43805 119 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms